RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 UMODL1-AS1Q8N2C9 162 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ENDOVQ8N8Q3 282 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 TDRD5Q8NAT2 981 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 KLHDC9Q8NEP7 349 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 OR10T2Q8NGX3 314 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SPPL2BQ8TCT7 592 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RAET1EQ8TD07 263 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 STON2Q8WXE9 905 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SEPT8Q92599 483 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 N4BP2L2Q92802 583 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC7A6OSQ96CW6 309 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ATXN7L3BQ96GX2 97 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ABHD8Q96I13 439 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ELMO2Q96JJ3 720 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 BTN2A3PQ96KV6 586 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CEP295NLQ96MC4 621 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RANBP9Q96S59 729 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MYCBPQ99417 103 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PKMYT1Q99640 499 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 GPR22Q99680 433 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 DDX50Q9BQ39 737 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 APOL2Q9BQE5 337 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RTP3Q9BQQ7 232 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MLPHQ9BV36 600 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CADM1Q9BY67 442 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ACE2Q9BYF1 805 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RHOBTB2Q9BYZ6 727 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 NMUR2Q9GZQ4 415 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CDH19Q9H159 772 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC25A51Q9H1U9 297 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 VCXQ9H320 206 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ELAC1Q9H777 363 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 KCNK13Q9HB14 408 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PLAC1Q9HBJ0 212 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MRPL40Q9NQ50 206 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 STARD7Q9NQZ5 370 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PIH1D1Q9NWS0 290 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM161AQ9NX61 479 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CLIC5Q9NZA1 410 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CACNG4Q9UBN1 327 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ZNF212Q9UDV6 495 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CDYLQ9Y232 598 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RAP2CQ9Y3L5 183 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 TCAF1Q9Y4C2 921 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PSAT1Q9Y617 370 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 F5H5T6 163 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 H0Y8X5 98 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 LIN7AO14910 233 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NVLO15381 856 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MSI1O43347 362 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CACNG3O60359 315 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MGEA5O60502 916 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RAMP2O60895 175 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PEX11AO75192 247 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 FKBP6O75344 327 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TM7SF2O76062 418 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 VAPBO95292 243 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PAPSS2O95340 614 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PSMG1O95456 288 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TP53P04637 393 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ALDH2P05091 517 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 C2P06681 752 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 THRAP10827 490 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CKBP12277 381 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ALOX15P16050 662 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NCF2P19878 526 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NMBRP28336 390 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CCND3P30281 292 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ADSLP30566 484 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ETFBP38117 255 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC11A2P49281 568 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RPL14P50914 215 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RAP1GDS1P52306 607 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CACNA2D1P54289 1103 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MLLT6P55198 1093 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 WNT3AP56704 352 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SRSF3P84103 164 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC34A1Q06495 639 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 DSC1Q08554 894 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 EFEMP1Q12805 493 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 LAPTM5Q13571 262 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 POU6F1Q14863 301 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 POLD3Q15054 466 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RCN1Q15293 331 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MGAT5BQ3V5L5 792 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PLEKHG4Q58EX7 1191 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RABGAP1LQ5R372 815 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 LCE4AQ5TA78 99 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MANEALQ5VSG8 457 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ZNF470Q6ECI4 717 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 LRRC8EQ6NSJ5 796 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MRNIPQ6NTE8 343 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NEPROQ6NW34 567 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CCDC81Q6ZN84 652 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RINLQ6ZS11 566 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ZCCHC23Q6ZST2 131 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ANKS3Q6ZW76 656 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 LRRC8DQ7L1W4 858 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 OTOP3Q7RTS5 596 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 BHLHA9Q7RTU4 235 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms