RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PCYOX1Q9UHG3 505 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.34□□□□□ -0.43
DDX56-209ENST00000473924 GLYATL1P3A0A0U1RQE8 302 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 TMEM202A6NGA9 273 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 FADS2P1A8MWK0 482 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 AP3B1O00203 1094 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 FLRT2O43155 660 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 PCDHGA12O60330 932 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 RASGRP1O95267 797 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 ASMTLO95671 621 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 SOD1P00441 154 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 TNFP01375 233 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 CTSEP14091 401 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 NME1P15531 152 aaKnown RBP12.34□□□□□ -0.43
DDX56-209ENST00000473924 TPSB2P20231 275 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 ADCY8P40145 1251 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 HADHAP40939 763 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 GRIA1P42261 906 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
DDX56-209ENST00000473924 TMPRSS15P98073 1019 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 BNIP3Q12983 259 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 SHBQ15464 509 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 TPSAB1Q15661 275 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 PDPK2PQ6A1A2 396 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 DOK6Q6PKX4 331 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 FAM151BQ6UXP7 276 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 SYDE1Q6ZW31 735 aaPredicted RBP12.34□□□□□ -0.43
DDX56-209ENST00000473924 PHACTR4Q8IZ21 702 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 SLCO2A1Q92959 643 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 KRT12Q99456 494 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 RTKNQ9BST9 563 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
DDX56-209ENST00000473924 CASS4Q9NQ75 786 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 NFKBIL1Q9UBC1 381 aaPredicted RBP12.34□□□□□ -0.43
DDX56-209ENST00000473924 NEU2Q9Y3R4 380 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 KCTD3Q9Y597 815 aa12.34□□□□□ -0.43
DDX56-209ENST00000473924 LAMA1P25391 3075 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 HEATR9A2RTY3 570 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 NEMP2A6NFY4 417 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 TNFRSF10CO14798 259 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 LDB2O43679 373 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 PIAS2O75928 621 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
DDX56-209ENST00000473924 CD59P13987 128 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 DGKAP23743 735 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 HK3P52790 923 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 SESN2P58004 480 aaPredicted RBP12.33□□□□□ -0.44
DDX56-209ENST00000473924 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
DDX56-209ENST00000473924 MSLNQ13421 630 aaPredicted RBP12.33□□□□□ -0.44
DDX56-209ENST00000473924 LAMB3Q13751 1172 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 ITGA9Q13797 1035 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 PTK6Q13882 451 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.44
DDX56-209ENST00000473924 ALG11Q2TAA5 492 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 PRRT3Q5FWE3 981 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 TRIM74Q86UV6 250 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 PHYKPLQ8IUZ5 450 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 NAXDQ8IW45 347 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 RBFAQ8N0V3 343 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 SPATA4Q8NEY3 305 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 GDAP1Q8TB36 358 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 SLC32A1Q9H598 525 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 CYP4F12Q9HCS2 524 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 FGF22Q9HCT0 170 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 IL26Q9NPH9 171 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 MRPL40Q9NQ50 206 aaKnown RBP12.33□□□□□ -0.44
DDX56-209ENST00000473924 BFARQ9NZS9 450 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 SPASTQ9UBP0 616 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 KLF15Q9UIH9 416 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 CDC23Q9UJX2 597 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 APPL1Q9UKG1 709 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 TMEM98Q9Y2Y6 226 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 KNL1Q8NG31 2342 aa12.33□□□□□ -0.44
DDX56-209ENST00000473924 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 PRSS38A1L453 326 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 CCDC78A2IDD5 438 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 SCAMP1O15126 338 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 TTI1O43156 1089 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 AQP9O43315 295 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 SH3BP5O60239 455 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 KCNA4P22459 653 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 ADRA1DP25100 572 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 PTGIRP43119 386 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 GRK6P43250 576 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 ID4P47928 161 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 POLD2P49005 469 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 NPY2RP49146 381 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 ZNF140P52738 457 aaPredicted RBP12.32□□□□□ -0.44
DDX56-209ENST00000473924 C2orf54Q08AI8 447 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 KCNJ11Q14654 390 aa12.32□□□□□ -0.44
DDX56-209ENST00000473924 PUM1Q14671 1186 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX56-209ENST00000473924 ELOCQ15369 112 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms