RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	ZNF408	Q9H9D4	720 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	MOV10	Q9HCE1	1003 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ABCC13	Q9NSE7	274 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	CRYL1	Q9Y2S2	319 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311		A0A0J9YYE9	177 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	OR51F1	A6NGY5	319 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ARL5C	A6NH57	179 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	MTRF1	O75570	445 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ALOX5	P09917	674 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	TFPT	P0C1Z6	253 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	JAK1	P23458	1154 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	NDST2	P52849	883 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	CDH15	P55291	814 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	PRKCQ	Q04759	706 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	SUZ12	Q15022	739 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	TBCEL	Q5QJ74	424 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	LDLRAD1	Q5T700	205 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	TMEM207	Q6UWW9	146 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	HACD2	Q6Y1H2	254 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	GPR180	Q86V85	440 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	METTL23	Q86XA0	190 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ZNF354C	Q86Y25	554 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	MMAA	Q8IVH4	418 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	RTL3	Q8N8U3	475 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	HDAC10	Q969S8	669 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	PABPC5	Q96DU9	382 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	LRCH3	Q96II8	777 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ANKRD60	Q9BZ19	345 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	AKTIP	Q9H8T0	292 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	LIN28A	Q9H9Z2	209 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	HACD3	Q9P035	362 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	CRNN	Q9UBG3	495 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	GIMAP2	Q9UG22	337 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	SEPT3	Q9UH03	358 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311	ERGIC3	Q9Y282	383 aa		13.96	□□□□□ -0.17
ABCF3-210	ENST00000473311		C9JVG2	144 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	HAS3	O00219	553 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	TPST1	O60507	370 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	B3GAT3	O94766	335 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	KRT6C	P48668	564 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	PGF	P49763	221 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	SLC14A2	Q15849	920 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	TRIM16L	Q309B1	348 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	EGFLAM	Q63HQ2	1017 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	GPR141	Q7Z602	305 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	TFAP2D	Q7Z6R9	452 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	ISCA2	Q86U28	154 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	FIBCD1	Q8N539	461 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	HM13	Q8TCT9	377 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	ROPN1L	Q96C74	230 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	KLHL5	Q96PQ7	755 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	TCF12	Q99081	682 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	RGS18	Q9NS28	235 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	DUS2	Q9NX74	493 aa	Known RBP	13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	EGFL7	Q9UHF1	273 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	DSE	Q9UL01	958 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	ST3GAL5	Q9UNP4	418 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	PTGDR2	Q9Y5Y4	395 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	SLC30A1	Q9Y6M5	507 aa		13.96	□□□□□ -0.18
ABCF3-210	ENST00000473311	NME4	O00746	187 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	S100B	P04271	92 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	GPX3	P22352	226 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	HTR7	P34969	479 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ARSD	P51689	593 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	UNC50	Q53HI1	259 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	NHSL2	Q5HYW2	709 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	PPP4R4	Q6NUP7	873 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ERMP1	Q7Z2K6	904 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	CLYBL	Q8N0X4	340 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ANKFN1	Q8N957	763 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	SH3RF2	Q8TEC5	729 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ACBD6	Q9BR61	282 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ARNT2	Q9HBZ2	717 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	FBXO9	Q9UK97	447 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	HS3ST4	Q9Y661	456 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	TANC1	Q9C0D5	1861 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	TTC24	A2A3L6	582 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	CFAP99	D6REC4	459 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311		M0QZ92	97 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ANGPT2	O15123	496 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	BMP10	O95393	424 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	CTSH	P09668	335 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	UGT1A6	P19224	532 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	RPL10	P27635	214 aa	Known RBP	13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ATP4B	P51164	291 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ATP6V0D1	P61421	351 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	ATP1A4	Q13733	1029 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	UPP1	Q16831	310 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	VPS26B	Q4G0F5	336 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	NANOGP8	Q6NSW7	305 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	FAM171B	Q6P995	826 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	VASH1	Q7L8A9	365 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	LRRTM3	Q86VH5	581 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	PTER	Q96BW5	349 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	L3HYPDH	Q96EM0	354 aa		13.95	□□□□□ -0.18
ABCF3-210	ENST00000473311	SMOC2	Q9H3U7	446 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms