RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 NSUN2Q08J23 767 aaKnown RBP eCLIP10.08□□□□□ -0.8
APTX-216ENST00000472896 SELPLGQ14242 412 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 SMTNL2Q2TAL5 461 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 SPATS1Q496A3 300 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 RBM48Q5RL73 367 aaKnown RBP10.08□□□□□ -0.8
APTX-216ENST00000472896 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
APTX-216ENST00000472896 TDRD10Q5VZ19 366 aaKnown RBP10.08□□□□□ -0.8
APTX-216ENST00000472896 GTF2IRD2BQ6EKJ0 949 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 SLC39A4Q6P5W5 647 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 KIAA0408Q6ZU52 694 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 USP51Q70EK9 711 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 GTF2IRD2Q86UP8 949 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ARMC8Q8IUR7 673 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 C4orf19Q8IY42 314 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 CBR4Q8N4T8 237 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ARFGAP1Q8N6T3 406 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 PIK3C3Q8NEB9 887 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ANGPTL6Q8NI99 470 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 SNX19Q92543 992 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ZNF707Q96C28 371 aaPredicted RBP10.08□□□□□ -0.8
APTX-216ENST00000472896 NPAS2Q99743 824 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 CPNE1Q99829 537 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 EMILIN2Q9BXX0 1053 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 OR2B2Q9GZK3 357 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 FBXO8Q9NRD0 319 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ASNSD1Q9NWL6 643 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 GMIPQ9P107 970 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 TXNDC16Q9P2K2 825 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 MTF2Q9Y483 593 aaPredicted RBP10.08□□□□□ -0.8
APTX-216ENST00000472896 DCDC2BA2VCK2 349 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 C16orf96A6NNT2 1141 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 E7ENX8 843 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 PIK3R2O00459 728 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 ASNA1O43681 348 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 TIPRLO75663 272 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 VNN1O95497 513 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 PSAPP07602 524 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 ENO2P09104 434 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 TNNI1P19237 187 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 TCN1P20061 433 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 FASP25445 335 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 GRIA3P42263 894 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 NPTX2P47972 431 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 ATXN3P54252 364 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 RAD23AP54725 363 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 STX1BP61266 288 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 YWHAEP62258 255 aaKnown RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 LRP8Q14114 963 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 NEDD8Q15843 81 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 INAVAQ3KP66 663 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 ATAD3BQ5T9A4 648 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 BTBD8Q5XKL5 378 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 SIGIRRQ6IA17 410 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 ZC3H14Q6PJT7 736 aaKnown RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 ZNF534Q76KX8 674 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 ANKRD52Q8NB46 1076 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 CENPNQ96H22 339 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 FAM213AQ9BRX8 229 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 GATA5Q9BWX5 397 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 CALN1Q9BXU9 219 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 WDR55Q9H6Y2 383 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 ANKHQ9HCJ1 492 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 SCUBE2Q9NQ36 999 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 CHST12Q9NRB3 414 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 OXSMQ9NWU1 459 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 SMPD3Q9NY59 655 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 TMEM181Q9P2C4 612 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 IFT80Q9P2H3 777 aaPredicted RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 PCDHA10Q9Y5I2 948 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 COPG1Q9Y678 874 aaKnown RBP10.07□□□□□ -0.8
APTX-216ENST00000472896 ACACBO00763 2458 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 COL4A3Q01955 1670 aa10.07□□□□□ -0.8
APTX-216ENST00000472896 RNF103-CHMP3A0A140T963 221 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 EVPLLA8MZ36 301 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 ZNF487B1APH4 448 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 ANHXE9PGG2 379 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 PSMD11O00231 422 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 INPPL1O15357 1258 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 TEX28O15482 410 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 DYRK3O43781 588 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 SCO2O43819 266 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 SRP72O76094 671 aaKnown RBP10.06□□□□□ -0.8
APTX-216ENST00000472896 PGAM1P18669 254 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 YWHABP31946 246 aaKnown RBP10.06□□□□□ -0.8
APTX-216ENST00000472896 SPRP35270 261 aaPredicted RBP10.06□□□□□ -0.8
APTX-216ENST00000472896 AP3M2P53677 418 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 PHC1P78364 1004 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 SEMA5AQ13591 1074 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 SLC12A1Q13621 1099 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 SQLEQ14534 574 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 UGCGQ16739 394 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 PPP6R3Q5H9R7 873 aaPredicted RBP10.06□□□□□ -0.8
APTX-216ENST00000472896 KCNT1Q5JUK3 1230 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 PERM1Q5SV97 790 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 LIPMQ5VYY2 423 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 PRMT9Q6P2P2 845 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
APTX-216ENST00000472896 GALNT13Q8IUC8 556 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms