RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 C1orf232A0A0U1RR37 186 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 CDRT15L2A8MXV6 281 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 AGRPO00253 132 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 PPP1R12AO14974 1030 aaPredicted RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 INPP4BO15327 924 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 IVLP07476 585 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 COMTP21964 271 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 ADCY8P40145 1251 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 SLC1A1P43005 524 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 NOP2P46087 812 aaKnown RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 INHBCP55103 352 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 RPL26P61254 145 aaKnown RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 LY6DQ14210 128 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 GALNT3Q14435 633 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 PDK1Q15118 436 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 QPCTQ16769 361 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 LRRC38Q5VT99 294 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 ZNF765Q7L2R6 523 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 SPRED1Q7Z699 444 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 VSIG1Q86XK7 387 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 CNTD1Q8N815 330 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 SNRNP27Q8WVK2 155 aaKnown RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 TTC9Q92623 222 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 AGAP3Q96P47 875 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 OR2M4Q96R27 311 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 CDH19Q9H159 772 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 TRNAU1APQ9NX07 287 aaKnown RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 DDX56Q9NY93 547 aaKnown RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 APPL1Q9UKG1 709 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 INTUQ9ULD6 942 aa15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 RPL26L1Q9UNX3 145 aaKnown RBP15.64■□□□□ 0.09
CCDC88B-205ENST00000472524 TNFSF15O95150 251 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 ASMTLO95671 621 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 FGF1P05230 155 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 PYGLP06737 847 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 ZFXP17010 805 aaPredicted RBP15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 MAGEA1P43355 309 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 CTBSQ01459 385 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 CLN3Q13286 438 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 LLGL1Q15334 1064 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 KAZNQ674X7 775 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 SARM1Q6SZW1 724 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 MFSD7Q6UXD7 560 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 KDELC2Q7Z4H8 507 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 NRSN1Q8IZ57 195 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 ARL14Q8N4G2 192 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 TC2NQ8N9U0 490 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 PATE1Q8WXA2 126 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 WBP1Q96G27 269 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 LIN37Q96GY3 246 aaPredicted RBP15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 TMEM74Q96NL1 305 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 OLFM3Q96PB7 478 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 MLPHQ9BV36 600 aaPredicted RBP15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 STRADBQ9C0K7 418 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 GOLPH3Q9H4A6 298 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 PLEKHM1Q9Y4G2 1056 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 ST14Q9Y5Y6 855 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 TENM4Q6N022 2769 aa15.63■□□□□ 0.09
CCDC88B-205ENST00000472524 RHPN2P1A8MT19 583 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 ANKRD66B4E2M5 251 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 NUDT21O43809 227 aaKnown RBP15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 ECEL1O95672 775 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 SLC4A1P02730 911 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 HGFP14210 728 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 PNLIPP16233 465 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 ACTR1BP42025 376 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 ACTR1AP61163 376 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 BIRC2Q13490 618 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 PCSK7Q16549 785 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 MAP9Q49MG5 647 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 KIAA1614Q5VZ46 1190 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 RAB11FIP2Q7L804 512 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 NT5DC3Q86UY8 548 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 GALNT13Q8IUC8 556 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 FBXO39Q8N4B4 442 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 EXD1Q8NHP7 514 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 CCHCR1Q8TD31 782 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 LYSMD1Q96S90 227 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 ADGRE3Q9BY15 652 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 PKD2L2Q9NZM6 624 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 TFR2Q9UP52 801 aa15.62■□□□□ 0.09
CCDC88B-205ENST00000472524 TMX2-CTNND1H3BSU7 103 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 J3QKU1 62 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 K7ENP7 123 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 PLD2O14939 933 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 PSTPIP1O43586 416 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 ATP1A1P05023 1023 aaKnown RBP15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 PIRTP0C851 137 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 CDKN2BP42772 138 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 SPINT3P49223 89 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 OR1D5P58170 312 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 TCEAL1Q15170 157 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 AMZ1Q400G9 498 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 INO80CQ6PI98 192 aaPredicted RBP15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 LYSMD3Q7Z3D4 306 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 CLEC14AQ86T13 490 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 NLRP8Q86W28 1048 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 JAMLQ86YT9 394 aa15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 CCDC97Q96F63 343 aaPredicted RBP15.61■□□□□ 0.09
CCDC88B-205ENST00000472524 IMP4Q96G21 291 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms