RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 DTLQ9NZJ0 730 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 INVSQ9Y283 1065 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 MAN2B1O00754 1011 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 GOT2P00505 430 aaKnown RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 STX4Q12846 297 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 FAM98BQ52LJ0 330 aaKnown RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 ZNF544Q6NX49 715 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 SCIMPQ6UWF3 145 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 LDB1Q86U70 411 aaPredicted RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 AMZ2Q86W34 360 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 SRFBP1Q8NEF9 429 aaKnown RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 BACE2Q9Y5Z0 518 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 PIAS1O75925 651 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 FGD3Q5JSP0 725 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 CMC1Q7Z7K0 106 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 TRIM69Q86WT6 500 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 CYP4Z2PQ8N1L4 340 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 POMGNT2Q8NAT1 580 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 ACTRT2Q8TDY3 377 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 AP3M1Q9Y2T2 418 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 PRKCGP05129 697 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 NSG1P42857 185 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 TBL3Q12788 808 aaKnown RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 INTS11Q5TA45 600 aaKnown RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 RIN3Q8TB24 985 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 SMARCD2Q92925 531 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
IRF1-208ENST00000472045 FNIP2Q9P278 1114 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 NCDNQ9UBB6 729 aa12.22□□□□□ -0.45
IRF1-208ENST00000472045 C5P01031 1676 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 GRIN2DO15399 1336 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 NEMP2A6NFY4 417 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 FCHO1O14526 889 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 FFAR2O15552 330 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 PRMT3O60678 531 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 KLF8O95600 359 aaPredicted RBP12.21□□□□□ -0.45
IRF1-208ENST00000472045 RXRGP48443 463 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 MLLT6P55198 1093 aaPredicted RBP12.21□□□□□ -0.45
IRF1-208ENST00000472045 RNASEH2BQ5TBB1 312 aaKnown RBP12.21□□□□□ -0.45
IRF1-208ENST00000472045 LIPMQ5VYY2 423 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 DEFB107AQ8IZN7 70 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 DTNBP1Q96EV8 351 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 KLHL20Q9Y2M5 609 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 B4DGG1 531 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 LAMTOR5O43504 91 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 SNUPNO95149 360 aaKnown RBP12.21□□□□□ -0.45
IRF1-208ENST00000472045 TNFP01375 233 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 BIKQ13323 160 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 MSANTD2Q6P1R3 559 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 LPCAT2Q7L5N7 544 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 SNX32Q86XE0 403 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 GATAD2AQ86YP4 633 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 GDPD5Q8WTR4 605 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 CIDEBQ9UHD4 219 aa12.21□□□□□ -0.45
IRF1-208ENST00000472045 RGPD1P0DJD0 1748 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 AZIN1O14977 448 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 DCXO43602 365 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 ERN1O75460 977 aaKnown RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 FCGR1AP12314 374 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 H2AFXP16104 143 aaPredicted RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 PTGER3P43115 390 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 MYLK3Q32MK0 819 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 LSM12Q3MHD2 195 aaKnown RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 GPAT3Q53EU6 434 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 MS4A13Q5J8X5 152 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 TMEM164Q5U3C3 297 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 NIPA2Q8N8Q9 360 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 PRICKLE1Q96MT3 831 aaPredicted RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 TMEM209Q96SK2 561 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 CDCA3Q99618 268 aaPredicted RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 RXFP1Q9HBX9 757 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 KLC4Q9NSK0 619 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 RAB21Q9UL25 225 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 HEPACAM2A8MVW5 462 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 GTPBP1O00178 669 aaKnown RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 COCHO43405 550 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 STK16O75716 305 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 CTSAP10619 480 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 SOX4Q06945 474 aaPredicted RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 MINDY4Q4G0A6 757 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 SETD7Q8WTS6 366 aaKnown RBP12.21□□□□□ -0.46
IRF1-208ENST00000472045 RAD51AP1Q96B01 352 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 TCF12Q99081 682 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 SEPHS2Q99611 448 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 TBCDQ9BTW9 1192 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 ATG10Q9H0Y0 220 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 RERGLQ9H628 205 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 MAFFQ9ULX9 164 aa12.21□□□□□ -0.46
IRF1-208ENST00000472045 LCA5LO95447 670 aa12.2□□□□□ -0.46
IRF1-208ENST00000472045 KRT75O95678 551 aa12.2□□□□□ -0.46
IRF1-208ENST00000472045 ADH1BP00325 375 aa12.2□□□□□ -0.46
IRF1-208ENST00000472045 GSNP06396 782 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms