RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 C17orf53Q8N3J3 647 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-209ENST00000472044 B4GALNT2Q8NHY0 566 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 PHF21BQ96EK2 531 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 EGLN2Q96KS0 407 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 SERINC2Q96SA4 455 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 KXD1Q9BQD3 176 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 NTPCRQ9BSD7 190 aaKnown RBP3.84□□□□□ -1.79
PTCD3-209ENST00000472044 TEX12Q9BXU0 123 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 MRPL44Q9H9J2 332 aaKnown RBP3.84□□□□□ -1.79
PTCD3-209ENST00000472044 PCDH9Q9HC56 1237 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 CLIC5Q9NZA1 410 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 WNT16Q9UBV4 365 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 SLC9A2Q9UBY0 812 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 OR14J1Q9UGF5 321 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 SEC63Q9UGP8 760 aaKnown RBP3.84□□□□□ -1.79
PTCD3-209ENST00000472044 CMAHPQ9Y471 501 aa3.84□□□□□ -1.79
PTCD3-209ENST00000472044 A0A1W2PR77 199 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 OR2A25A4D2G3 310 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 B4DLN1 442 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 M0QZ24 198 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 OGG1O15527 345 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 FIBPO43427 364 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 KCNJ13O60928 360 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 MITFO75030 526 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 TMCC2O75069 709 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 GPC4O75487 556 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 TPPPO94811 219 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 ANXA7P20073 488 aaKnown RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 GCH1P30793 250 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 SLC15A1P46059 708 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 PCYT1AP49585 367 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 MRPL12P52815 198 aaKnown RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 LINC00205P59089 165 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 EGR4Q05215 589 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 SREBF2Q12772 1141 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 DECR1Q16698 335 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 PNLIPRP3Q17RR3 467 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 ZNF805Q5CZA5 627 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 DCST1Q5T197 706 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 LCN10Q6JVE6 187 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 KCTD18Q6PI47 426 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 ENOSF1Q7L5Y1 443 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 GALNT5Q7Z7M9 940 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 NRROSQ86YC3 692 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 BEST3Q8N1M1 668 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 IQCF1Q8N6M8 205 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 POC5Q8NA72 575 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 OR8K5Q8NH50 307 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 MIB2Q96AX9 1013 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 MOAP1Q96BY2 351 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 SAT2Q96F10 170 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 SRSF8Q9BRL6 282 aaKnown RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 TMEM39BQ9GZU3 492 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 SIL1Q9H173 461 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 EPB41L5Q9HCM4 733 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 NKIRAS2Q9NYR9 191 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 WSB2Q9NYS7 404 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 PCDHGB4Q9UN71 923 aa3.83□□□□□ -1.8
PTCD3-209ENST00000472044 R3HDM2Q9Y2K5 976 aaKnown RBP3.83□□□□□ -1.8
PTCD3-209ENST00000472044 hDV102S1A0JD36 115 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 SOCS6O14544 535 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 SMAD9O15198 467 aaKnown RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 PAPSS1O43252 624 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 SPINT2O43291 252 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 RFPL2O75678 378 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 BEST1O76090 585 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 DDNO94850 711 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 ICAM1P05362 532 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 SELLP14151 372 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 BDKRB2P30411 391 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 GPR143P51810 404 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 PNLIPRP2P54317 469 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 MFAP4P55083 255 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 SNX16P57768 344 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 FOXM1Q08050 763 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 PCLAFQ15004 111 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 OASLQ15646 514 aaKnown RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 CTF1Q16619 201 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 ATP13A5Q4VNC0 1218 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 CFAP58Q5T655 872 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 DUS1LQ6P1R4 473 aaKnown RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 FAM122CQ6P4D5 195 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 SLC36A4Q6YBV0 504 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 CLEC17AQ6ZS10 378 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 ADGRA1Q86SQ6 560 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 PRPF39Q86UA1 669 aaKnown RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 FBXL14Q8N1E6 418 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 TMTC2Q8N394 836 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-209ENST00000472044 ELP5Q8TE02 316 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 WASF1Q92558 559 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 RND1Q92730 232 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 APBB2Q92870 758 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 TAAR8Q969N4 342 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 JAKMIP2Q96AA8 810 aa3.82□□□□□ -1.8
PTCD3-209ENST00000472044 GRAMD2BQ96HH9 432 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms