RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 TMCO1Q9UM00 188 aa4.46□□□□□ -1.7
LMNB1-205ENST00000472034 TNFSF13BQ9Y275 285 aa4.46□□□□□ -1.7
LMNB1-205ENST00000472034 PKD1L1Q8TDX9 2849 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 FLNAP21333 2647 aaKnown RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CYP3A7-CYP3A51PA0A087WV96 503 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TRIM64A6NGJ6 449 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TRIM64BA6NI03 449 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CYB561D2O14569 222 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CETN3O15182 167 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 COCHO43405 550 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PLOD3O60568 738 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 KLHL41O60662 606 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 ZG16O60844 167 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 KCNJ13O60928 360 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PALMO75781 387 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PIAS2O75928 621 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CNTN5O94779 1100 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 ECDO95905 644 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 ITGB3P05106 788 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 SCG5P05408 212 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 DLATP10515 647 aaKnown RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TYRP1P17643 537 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CYP3A7P24462 503 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 GCKP35557 465 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 LIFRP42702 1097 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CENPAP49450 140 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 MAN2A2P49641 1150 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 MAPK10P53779 464 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PMS2P54278 862 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 MFAP3P55082 362 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 APBA1Q02410 837 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 MAP4K2Q12851 820 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TBX2Q13207 712 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 EPHA7Q15375 998 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PPP1R7Q15435 360 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 METTL11BQ5VVY1 283 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 BICRALQ6AI39 1079 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 SLC30A9Q6PML9 568 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CORO6Q6QEF8 472 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PPP1R21Q6ZMI0 780 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 ZNF517Q6ZMY9 492 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 NCCRP1Q6ZVX7 275 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CPNE8Q86YQ8 564 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CCDC50Q8IVM0 306 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 LZTR1Q8N653 840 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 GDAP1Q8TB36 358 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 GANCQ8TET4 914 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 GRAMD1AQ96CP6 724 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 RBM18Q96H35 190 aaKnown RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PSKH2Q96QS6 385 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 RANBP9Q96S59 729 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PKMYT1Q99640 499 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 ACO2Q99798 780 aaKnown RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 MYOCQ99972 504 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TUBA1CQ9BQE3 449 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PYM1Q9BRP8 204 aaKnown RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 SPATA9Q9BWV2 254 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 AP1M1Q9BXS5 423 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 UBXN6Q9BZV1 441 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 GLT8D2Q9H1C3 349 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 C2orf40Q9H1Z8 148 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 NEUROG2Q9H2A3 272 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 SERHL2Q9H4I8 314 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TTC12Q9H892 705 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 SGK2Q9HBY8 427 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 C6orf50Q9HD87 102 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TRPM5Q9NZQ8 1165 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 MTRF1LQ9UGC7 380 aaKnown RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 NUDT5Q9UKK9 219 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 TTC7AQ9ULT0 858 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CLEC4EQ9ULY5 219 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 DDX19BQ9UMR2 479 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 PHTF1Q9UMS5 762 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 CAB39Q9Y376 341 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 LOXL2Q9Y4K0 774 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 EPN1Q9Y6I3 576 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-205ENST00000472034 POLEQ07864 2286 aa4.45□□□□□ -1.7
LMNB1-205ENST00000472034 ANK3Q12955 4377 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ARPC4-TTLL3A0A0A6YYG9 625 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 C7orf72A4D263 438 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NOTOA8MTQ0 251 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 EIF3CLB5ME19 914 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 RASA4BC9J798 803 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 HRKO00198 91 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TOR1BO14657 336 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 DKC1O60832 514 aaKnown RBP eCLIP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ATP2C2O75185 946 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 SORBS2O94875 1100 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TMCC1O94876 653 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 KRT1P04264 644 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TMEM253P0C7T8 217 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 JMJD7P0C870 316 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PROZP22891 400 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 MAT2AP31153 395 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NAMPTP43490 491 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ACADSBP45954 432 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PPM1FP49593 454 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PGFP49763 221 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms