RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 HLA-DPA1P20036 260 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GNPDA1P46926 289 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 RPIAP49247 311 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GEMP55040 296 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 PRPSAP1Q14558 356 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 RPS6KA1Q15418 735 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 SLC1A5Q15758 541 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 SEL1L2Q5TEA6 688 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 HES3Q5TGS1 186 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 OGFOD3Q6PK18 319 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 DOK6Q6PKX4 331 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 EFL1Q7Z2Z2 1120 aaKnown RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 TRIM74Q86UV6 250 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 SLC35F3Q8IY50 421 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 ARL10Q8N8L6 244 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GPR26Q8NDV2 337 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 FAM46DQ8NEK8 389 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GPBAR1Q8TDU6 330 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 SCARF2Q96GP6 870 aaPredicted RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 ALS2CR12Q96Q35 445 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GORASP1Q9BQQ3 440 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 ABCG4Q9H172 646 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 DPEP2Q9H4A9 486 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 TRABDQ9H4I3 376 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 SUDS3Q9H7L9 328 aaPredicted RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 BPIFA1Q9NP55 256 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 RAD18Q9NS91 495 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 TRNAU1APQ9NX07 287 aaKnown RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 SIRPGQ9P1W8 387 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 PADI4Q9UM07 663 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GPR34Q9UPC5 381 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 R3HDM2Q9Y2K5 976 aaKnown RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 PPP2R2CQ9Y2T4 447 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 AAR2Q9Y312 384 aaKnown RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 GPSM3Q9Y4H4 160 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 OPA1O60313 960 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 MT-CO3P00414 261 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 ATP1A1P05023 1023 aaKnown RBP9.09□□□□□ -0.95
SYN3-211ENST00000472027 BPIP17213 487 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 PSMB4P28070 264 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 HMGCLP35914 325 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 ADCY8P40145 1251 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 TARDBPQ13148 414 aaKnown RBP eCLIP9.09□□□□□ -0.95
SYN3-211ENST00000472027 CAMK2BQ13554 666 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 PYCR3Q53H96 274 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 PERM1Q5SV97 790 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 ALS2CLQ60I27 953 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 RANBP10Q6VN20 620 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 MARK2Q7KZI7 788 aaKnown RBP9.09□□□□□ -0.95
SYN3-211ENST00000472027 NRROSQ86YC3 692 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 SLC13A5Q86YT5 568 aaPredicted RBP9.09□□□□□ -0.95
SYN3-211ENST00000472027 CACTIN-AS1Q8N1I8 211 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 TRAM1L1Q8N609 369 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 FAM71DQ8N9W8 422 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 GPR156Q8NFN8 814 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 SLC35B2Q8TB61 432 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 BLOC1S5Q8TDH9 187 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 SPATA13Q96N96 652 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 TMEM121Q9BTD3 319 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 FICDQ9BVA6 458 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 SPATA16Q9BXB7 569 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 FSD1LQ9BXM9 530 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 GSDMCQ9BYG8 508 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 CDH19Q9H159 772 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 SPATS2LQ9NUQ6 558 aaKnown RBP9.09□□□□□ -0.95
SYN3-211ENST00000472027 HACD3Q9P035 362 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 CLCA2Q9UQC9 943 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 ST14Q9Y5Y6 855 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 OAS3Q9Y6K5 1087 aaKnown RBP9.09□□□□□ -0.95
SYN3-211ENST00000472027 TDRD6O60522 2096 aaKnown RBP9.09□□□□□ -0.95
SYN3-211ENST00000472027 KNL1Q8NG31 2342 aa9.09□□□□□ -0.95
SYN3-211ENST00000472027 CABIN1Q9Y6J0 2220 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 TRABD2BA6NFA1 517 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 LIASO43766 372 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 NOBOXO60393 691 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 DNAJC6O75061 913 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 SLC25A14O95258 325 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 METTL18O95568 372 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 CAPNS1P04632 268 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 FGF1P05230 155 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 AK4P27144 223 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 STIP1P31948 543 aaKnown RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 ADRA1AP35348 466 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 GDF10P55107 478 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 DCDC1P59894 354 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 CTBSQ01459 385 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 ILF3Q12906 894 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYN3-211ENST00000472027 OLIG2Q13516 323 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PARP6Q2NL67 630 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 ZNF648Q5T619 568 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 CDCP2Q5VXM1 449 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 GLT6D1Q7Z4J2 308 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 PDCD7Q8N8D1 485 aaKnown RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 DCBLD1Q8N8Z6 715 aa9.08□□□□□ -0.96
SYN3-211ENST00000472027 KDF1Q8NAX2 398 aaPredicted RBP9.08□□□□□ -0.96
SYN3-211ENST00000472027 KYQ8NBH2 561 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms