RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PLXDC1Q8IUK5 500 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 SRRM1Q8IYB3 904 aaKnown RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 LZTR1Q8N653 840 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 SLC30A5Q8TAD4 765 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 SLC25A23Q9BV35 468 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 NAA15Q9BXJ9 866 aaKnown RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 MLXIPLQ9NP71 852 aa18.86■□□□□ 0.61
SORT1-203ENST00000471996 ERRFI1Q9UJM3 462 aaPredicted RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 PCDHGA9Q9Y5G4 932 aaKnown RBP18.86■□□□□ 0.61
SORT1-203ENST00000471996 DOPEY1Q5JWR5 2465 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.85■□□□□ 0.61
SORT1-203ENST00000471996 NDUFA10O95299 355 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 LDLRP01130 860 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 CCNYL3P0C7X3 344 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 CYP2A6P11509 494 aaPredicted RBP18.85■□□□□ 0.61
SORT1-203ENST00000471996 NFKBIAP25963 317 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 HTR7P34969 479 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 AIF1P55008 147 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 TPI1P60174 286 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 DNASE1L3Q13609 305 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 IL11RAQ14626 422 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 C1QL3Q5VWW1 255 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 IYDQ6PHW0 289 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 TECPR1Q7Z6L1 1165 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 SLC9B2Q86UD5 537 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 ZNF677Q86XU0 584 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 FNIP1Q8TF40 1166 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 TCTN2Q96GX1 697 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.85■□□□□ 0.61
SORT1-203ENST00000471996 SLC29A3Q9BZD2 475 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 PADI1Q9ULC6 663 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 PCDHGC4Q9Y5F7 938 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 MED13Q9UHV7 2174 aa18.85■□□□□ 0.61
SORT1-203ENST00000471996 SHANK1Q9Y566 2161 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 GOLGA6L3A6NEY3 463 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 SOCS5O75159 536 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 CPP00450 1065 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 C9P02748 559 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 CASP14P31944 242 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 GARSP41250 739 aaKnown RBP18.84■□□□□ 0.61
SORT1-203ENST00000471996 PTP4A2Q12974 167 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 MAN2A1Q16706 1144 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 PRR30Q53SZ7 412 aaPredicted RBP18.84■□□□□ 0.61
SORT1-203ENST00000471996 PAPD7Q5XG87 772 aaKnown RBP18.84■□□□□ 0.61
SORT1-203ENST00000471996 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 RASGRP3Q8IV61 690 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 PDCD6IPQ8WUM4 868 aaKnown RBP18.84■□□□□ 0.61
SORT1-203ENST00000471996 SLC20A1Q8WUM9 679 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 C9orf72Q96LT7 481 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 PSKH2Q96QS6 385 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 OR6C1Q96RD1 312 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 TBC1D10AQ9BXI6 508 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 SP110Q9HB58 689 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 NOCTQ9UK39 431 aaKnown RBP18.84■□□□□ 0.61
SORT1-203ENST00000471996 PHTF1Q9UMS5 762 aa18.84■□□□□ 0.61
SORT1-203ENST00000471996 FBN2P35556 2912 aa18.83■□□□□ 0.61
SORT1-203ENST00000471996 TTC24A2A3L6 582 aaPredicted RBP18.83■□□□□ 0.6
SORT1-203ENST00000471996 A6NCN8 305 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 NPIPB15A6NHN6 443 aaPredicted RBP18.83■□□□□ 0.6
SORT1-203ENST00000471996 F8VZ95 297 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 CCP110O43303 1012 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 RENBPP51606 427 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 GFERP55789 205 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 GSCP56915 257 aaPredicted RBP18.83■□□□□ 0.6
SORT1-203ENST00000471996 SH3BP2P78314 561 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 FMO1Q01740 532 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 CDR2Q01850 454 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 IL10RBQ08334 325 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 ARHGAP36Q6ZRI8 547 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 TSPAN33Q86UF1 283 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 THAP4Q8WY91 577 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 SEC14L1Q92503 715 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 HERPUD2Q9BSE4 406 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 SELENOOQ9BVL4 669 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 STK33Q9BYT3 514 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 ABCG8Q9H221 673 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 NDST4Q9H3R1 872 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 CNOT8Q9UFF9 292 aaKnown RBP18.83■□□□□ 0.6
SORT1-203ENST00000471996 LNPEPQ9UIQ6 1025 aa18.83■□□□□ 0.6
SORT1-203ENST00000471996 C21orf140B9A014 251 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 UCHL3P15374 230 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 CHRNB2P17787 502 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 VARSP26640 1264 aaKnown RBP18.82■□□□□ 0.6
SORT1-203ENST00000471996 ZNF143P52747 638 aaPredicted RBP18.82■□□□□ 0.6
SORT1-203ENST00000471996 CPZQ66K79 652 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 RFLNAQ6ZTI6 216 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 ARHGAP12Q8IWW6 846 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 CT55Q8WUE5 264 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 AP2M1Q96CW1 435 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 SCRN2Q96FV2 425 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 COX14Q96I36 57 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 MCCC1Q96RQ3 725 aaPredicted RBP18.82■□□□□ 0.6
SORT1-203ENST00000471996 ACTL8Q9H568 366 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 LHX9Q9NQ69 397 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 KIAA1468Q9P260 1216 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 ZNHIT2Q9UHR6 403 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 CD84Q9UIB8 345 aa18.82■□□□□ 0.6
SORT1-203ENST00000471996 PCYT1BQ9Y5K3 369 aaPredicted RBP18.82■□□□□ 0.6
SORT1-203ENST00000471996 KIR2DS5A0A0G2JLQ3 304 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms