RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PPARGP37231 505 aaPredicted RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 CDKN2DP55273 166 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 DCDC1P59894 354 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 NFATC2Q13469 925 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ENPP2Q13822 863 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ARHGEF7Q14155 803 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ZNF460Q14592 562 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 FAM83EQ2M2I3 478 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 GPR33Q49SQ1 333 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 C9orf64Q5T6V5 341 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ATG16L1Q676U5 607 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 CGB2Q6NT52 195 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ERAP2Q6P179 960 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 FAM151BQ6UXP7 276 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 SERPINA13PQ6UXR4 307 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ZYG11AQ6WRX3 759 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 FAM47EQ6ZV65 393 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 DPPA4Q7L190 304 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PARS2Q7L3T8 475 aaKnown RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 SPATS2Q86XZ4 545 aaKnown RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 SFTPA1Q8IWL2 248 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 RAVER1Q8IY67 606 aaKnown RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 MICALL1Q8N3F8 863 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ZNF366Q8N895 744 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PNPLA1Q8N8W4 532 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 DTX3LQ8TDB6 740 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 CSGALNACT1Q8TDX6 532 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PPP1R16AQ96I34 528 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 SEC16BQ96JE7 1060 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 UBXN10Q96LJ8 280 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 C7orf26Q96N11 449 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 BIRC8Q96P09 236 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 GPR78Q96P69 363 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 TTC1Q99614 292 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 RPP25Q9BUL9 199 aaKnown RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 MECRQ9BV79 373 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PITPNM3Q9BZ71 974 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 P2RY12Q9H244 342 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PCDH12Q9NPG4 1184 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 IL26Q9NPH9 171 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 TRPV5Q9NQA5 729 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 IGSF5Q9NSI5 407 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ZNF358Q9NW07 568 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PKD2L2Q9NZM6 624 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PPM1HQ9ULR3 514 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 PCDHB1Q9Y5F3 818 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 RGSL1A5PLK6 1076 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 TARM1B6A8C7 271 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 G3V2L1 256 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 PSMD11O00231 422 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 KPNA3O00505 521 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 SNNO75324 88 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 H2AFYO75367 372 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 VPS26AO75436 327 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SERPINE1P05121 402 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 LTA4HP09960 611 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 HLA-EP13747 358 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 PKMP14618 531 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 HNRNPLP14866 589 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS52-216ENST00000471309 ZNF37AP17032 561 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 XPAP23025 273 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 GRK2P25098 689 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 ALDH3A1P30838 453 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 MMP12P39900 470 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 IL12RB1P42701 662 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SPINT3P49223 89 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 CDKN1CP49918 316 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 PGGT1BP53609 377 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 PRKAA2P54646 552 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 IRX4P78413 519 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 TIAL1Q01085 375 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS52-216ENST00000471309 PTSQ03393 145 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 DMTNQ08495 405 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 BST1Q10588 318 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 DLG1Q12959 904 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 RALGDSQ12967 914 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SMAD4Q13485 552 aaKnown RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 ITGA9Q13797 1035 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 ITIH4Q14624 930 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 CHI3L2Q15782 390 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 TECRLQ5HYJ1 363 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 LRRC73Q5JTD7 316 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 CTSL3PQ5NE16 218 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 AGAP9Q5VTM2 703 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 KLC3Q6P597 504 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 TAS2R42Q7RTR8 314 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 OTOAQ7RTW8 1153 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SPATA21Q7Z572 469 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 DSG4Q86SJ6 1040 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 PIM3Q86V86 326 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 SERPINA9Q86WD7 417 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 RBFAQ8N0V3 343 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 NXPE1Q8N323 547 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 FSTL5Q8N475 847 aaPredicted RBP9.33□□□□□ -0.92
VPS52-216ENST00000471309 TMEM151AQ8N4L1 468 aa9.33□□□□□ -0.92
VPS52-216ENST00000471309 CCDC197Q8NCU1 140 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms