RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 GORASP1Q9BQQ3 440 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 KIFC1Q9BW19 673 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 TDRD1Q9BXT4 1180 aaKnown RBP6.66□□□□□ -1.34
VAMP3-202ENST00000470357 OSBPL1AQ9BXW6 950 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 TRABDQ9H4I3 376 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 TBC1D17Q9HA65 648 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 ZFYVE1Q9HBF4 777 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 NOD2Q9HC29 1040 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 LRRC4CQ9HCJ2 640 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 CYP4F12Q9HCS2 524 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 ZNF446Q9NWS9 450 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 NSMCE4AQ9NXX6 385 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 UBP1Q9NZI7 540 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 SUN2Q9UH99 717 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 SLC24A2Q9UI40 661 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 RIMKLBQ9ULI2 386 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 CLEC4EQ9ULY5 219 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 CHMP2BQ9UQN3 213 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 RAI2Q9Y5P3 530 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 IKBKGQ9Y6K9 419 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 FRYQ5TBA9 3013 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 CKAP5Q14008 2032 aa6.66□□□□□ -1.34
VAMP3-202ENST00000470357 COL4A3Q01955 1670 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 COL4A2P08572 1712 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 MUC22E2RYF6 1773 aaPredicted RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 EDDM13A0A1B0GTR0 161 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 EXOC1LA0A1B0GW35 172 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 TBC1D3BA6NDS4 549 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ANKRD66B4E2M5 251 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 GOLGA8KD6RF30 607 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ARNTLO00327 626 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 RASGRF2O14827 1237 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 MUSKO15146 869 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 HTRA2O43464 458 aaPredicted RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 CDH16O75309 829 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 AVILO75366 819 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 KAT7O95251 611 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 MT-CO1P00395 513 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 AGTP01019 485 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ADRB1P08588 477 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 SRFP11831 508 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 MGAT1P26572 445 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 OPRD1P41143 372 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 EPHB1P54762 984 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 SPARCL1Q14515 664 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ST3GAL2Q16842 350 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 GEN1Q17RS7 908 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 GAB4Q2WGN9 574 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 MYLK3Q32MK0 819 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 FNDC3BQ53EP0 1204 aaKnown RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 SIRPB2Q5JXA9 342 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 DGKKQ5KSL6 1271 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 CEP85LQ5SZL2 805 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 LGSNQ5TDP6 509 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 PDPK2PQ6A1A2 396 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 DENND5AQ6IQ26 1287 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 SDE2Q6IQ49 451 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 PKN3Q6P5Z2 889 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 BRAT1Q6PJG6 821 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 TRMT11Q7Z4G4 463 aaKnown RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 TMEM135Q86UB9 458 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 TDRPQ86YL5 185 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 LMNTD2Q8IXW0 634 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 RYBPQ8N488 228 aaPredicted RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 CALML6Q8TD86 181 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 BRSK1Q8TDC3 778 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 NELL1Q92832 810 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 CFAP36Q96G28 342 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 EXOC2Q96KP1 924 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 PWWP2AQ96N64 755 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ZIM3Q96PE6 472 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 P2RY13Q9BPV8 354 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 HEPHQ9BQS7 1158 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 PLA2G2FQ9BZM2 168 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 TM6SF2Q9BZW4 377 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 ACSS3Q9H6R3 686 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 FBRSQ9HAH7 460 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 GTSE1Q9NYZ3 720 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 STOML1Q9UBI4 398 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 GPN3Q9UHW5 284 aaPredicted RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 CA14Q9ULX7 337 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 PHTF1Q9UMS5 762 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 SIT1Q9Y3P8 196 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 TCAF1Q9Y4C2 921 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.65□□□□□ -1.34
VAMP3-202ENST00000470357 RPS6KL1Q9Y6S9 549 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 FAM169AQ9Y6X4 670 aa6.65□□□□□ -1.34
VAMP3-202ENST00000470357 FAM208BQ5VWN6 2430 aa6.65□□□□□ -1.35
VAMP3-202ENST00000470357 SPEGQ15772 3267 aa6.65□□□□□ -1.35
VAMP3-202ENST00000470357 FASNP49327 2511 aaKnown RBP6.65□□□□□ -1.35
VAMP3-202ENST00000470357 WDFY3Q8IZQ1 3526 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF106Q9H2Y7 1883 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 F5P12259 2224 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 TCRBV9S1A1TA0A576 114 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 C2orf81A6NN90 581 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 HMGB1P1B2RPK0 211 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 K7ERQ8 282 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms