RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-205	ENST00000470197	ASNSD1	Q9NWL6	643 aa		4.86	□□□□□ -1.63
GCFC2-205	ENST00000470197	TRMT112	Q9UI30	125 aa	Known RBP	4.86	□□□□□ -1.63
GCFC2-205	ENST00000470197	OSGIN1	Q9UJX0	560 aa		4.86	□□□□□ -1.63
GCFC2-205	ENST00000470197	NFS1	Q9Y697	457 aa		4.86	□□□□□ -1.63
GCFC2-205	ENST00000470197	ZNF541	Q9H0D2	1346 aa		4.86	□□□□□ -1.63
GCFC2-205	ENST00000470197	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.86	□□□□□ -1.63
GCFC2-205	ENST00000470197	GPR75-ASB3	A0A0A6YYF3	556 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	ENG	P17813	658 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	ACHE	P22303	614 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	RPA1	P27694	616 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	GSTM2	P28161	218 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	LMAN1	P49257	510 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SMU1	Q2TAY7	513 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	MAJIN	Q3KP22	176 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	LCTL	Q6UWM7	567 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SPATA20	Q8TB22	786 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	DCPS	Q96C86	337 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SLC28A3	Q9HAS3	691 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	CNTNAP1	P78357	1384 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	FAM208A	Q9UK61	1670 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	FEZF1	A0PJY2	475 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	PMS2P1	A4D2B8	440 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	PSMD14	O00487	310 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	PRPF4	O43172	522 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	REC8	O95072	547 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	C1R	P00736	705 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	GBA	P04062	536 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SHMT1	P34896	483 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	LIMK1	P53667	647 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	ADPRH	P54922	357 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	C2orf68	Q2NKX9	166 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	C5orf22	Q49AR2	442 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SEPT14	Q6ZU15	432 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	GDF7	Q7Z4P5	450 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	IQCH	Q86VS3	1027 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	POMGNT1	Q8WZA1	660 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	TEPSIN	Q96N21	525 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	UTP14A	Q9BVJ6	771 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	MBNL1	Q9NR56	388 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	DUSP10	Q9Y6W6	482 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	KIF7	Q2M1P5	1343 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	CXorf65	A6NEN9	183 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	DDTL	A6NHG4	134 aa	Predicted RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	LRRC53	A6NM62	1247 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	LPXN	O60711	386 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SEC22B	O75396	215 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	DES	P17661	470 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	ARFIP1	P53367	373 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	SF3B3	Q15393	1217 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	HLF	Q16534	295 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	KBTBD12	Q3ZCT8	623 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	STRIP1	Q5VSL9	837 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	TCTN3	Q6NUS6	607 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	CPLX2	Q6PUV4	134 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	TICAM1	Q8IUC6	712 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	BBS4	Q96RK4	519 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	MOSPD1	Q9UJG1	213 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	RRP15	Q9Y3B9	282 aa	Known RBP	4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	TEX264	Q9Y6I9	313 aa		4.85	□□□□□ -1.63
GCFC2-205	ENST00000470197	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	MROH6	A6NGR9	719 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	CCDC69	A6NI79	296 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	EXOC3	O60645	756 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	PPFIA2	O75334	1257 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	INHBB	P09529	407 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	APEH	P13798	732 aa	Known RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	HOXB9	P17482	250 aa	Predicted RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	VAV2	P52735	878 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	KLF10	Q13118	480 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.84	□□□□□ -1.63	3e-7	■■■■■ 29.3
GCFC2-205	ENST00000470197	SYTL3	Q4VX76	610 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197		Q6ZWC4	215 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	USP50	Q70EL3	339 aa	Predicted RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	FBXO39	Q8N4B4	442 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	UXS1	Q8NBZ7	420 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	THUMPD2	Q9BTF0	503 aa	Known RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	WDR6	Q9NNW5	1121 aa	Known RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	RAB9B	Q9NP90	201 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	ADARB2	Q9NS39	739 aa	Known RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	INTS13	Q9NVM9	706 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	SEMA5B	Q9P283	1151 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	XPO7	Q9UIA9	1087 aa	Known RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	C5	P01031	1676 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	OR6C68	A6NDL8	312 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	C5orf51	A6NDU8	294 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	TCAF2	A6NFQ2	919 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	GOLGA6L6	A8MZA4	724 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	INO80B-WBP1	J3KQ70	363 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	CREG1	O75629	220 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	CHRM2	P08172	466 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	EVC	P57679	992 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	HSP90AB3P	Q58FF7	597 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	MCTP1	Q6DN14	999 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	SETD6	Q8TBK2	473 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	TAS1R2	Q8TE23	839 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	NEU4	Q8WWR8	484 aa	Predicted RBP	4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	IGSF8	Q969P0	613 aa		4.84	□□□□□ -1.63
GCFC2-205	ENST00000470197	REXO4	Q9GZR2	422 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms