RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 POMKQ9H5K3 350 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 IL26Q9NPH9 171 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 B4GALT6Q9UBX8 382 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 APPL1Q9UKG1 709 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 FAM50BQ9Y247 325 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 GLYATL1P3A0A0U1RQE8 302 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 GOLGA8CPA6NN73 597 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.05■□□□□ 0.48
SMC4-211ENST00000469858 ITM2AO43736 263 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 LYPLA1O75608 230 aaPredicted RBP18.05■□□□□ 0.48
SMC4-211ENST00000469858 CHRM1P11229 460 aaPredicted RBP18.05■□□□□ 0.48
SMC4-211ENST00000469858 GJA4P35212 333 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 SPAM1P38567 509 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 SLC1A6P48664 564 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 EIF4HQ15056 248 aaKnown RBP18.05■□□□□ 0.48
SMC4-211ENST00000469858 POM121L1PQ3SYA9 428 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 KLC3Q6P597 504 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 CCDC91Q7Z6B0 441 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 PBXIP1Q96AQ6 731 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 ELSPBP1Q96BH3 223 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 BIRC8Q96P09 236 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 C19orf43Q9BQ61 176 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 MRPL57Q9BQC6 102 aaKnown RBP18.05■□□□□ 0.48
SMC4-211ENST00000469858 PLCD4Q9BRC7 762 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 ASB8Q9H765 288 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 ABCF3Q9NUQ8 709 aa18.05■□□□□ 0.48
SMC4-211ENST00000469858 TARM1B6A8C7 271 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 HGSO14964 777 aaPredicted RBP18.04■□□□□ 0.48
SMC4-211ENST00000469858 TGDSO95455 350 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 HLA-EP13747 358 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 ITGALP20701 1170 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 GRK2P25098 689 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 GDI1P31150 447 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 OPRD1P41143 372 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 SUOXP51687 545 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 NFATC2Q13469 925 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 CCDC121Q6ZUS5 278 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 TRPM8Q7Z2W7 1104 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 SNX20Q7Z614 316 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 CRLF3Q8IUI8 442 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 PHTF2Q8N3S3 785 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 SGF29Q96ES7 293 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 OSBPL1AQ9BXW6 950 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 POPDC3Q9HBV1 291 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 OXSMQ9NWU1 459 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 TAS2R13Q9NYV9 303 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 MARCOQ9UEW3 520 aaPredicted RBP18.04■□□□□ 0.48
SMC4-211ENST00000469858 XIRP2A4UGR9 3374 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 TNRC18O15417 2968 aaPredicted RBP18.04■□□□□ 0.48
SMC4-211ENST00000469858 A0A0G2JND7 137 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 TBC1D3BA6NDS4 549 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 CCT8L1PA6NM43 557 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 ANKRD65E5RJM6 399 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 TRIM13O60858 407 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 KITP10721 976 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 PKMP14618 531 aaKnown RBP18.04■□□□□ 0.48
SMC4-211ENST00000469858 ZNF37AP17032 561 aaPredicted RBP18.04■□□□□ 0.48
SMC4-211ENST00000469858 PTSQ03393 145 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 CTC1Q2NKJ3 1217 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 TECRLQ5HYJ1 363 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 CTSL3PQ5NE16 218 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 SERPINA9Q86WD7 417 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 STK40Q8N2I9 435 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 GPR26Q8NDV2 337 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 RPP25Q9BUL9 199 aaKnown RBP18.04■□□□□ 0.48
SMC4-211ENST00000469858 MED16Q9Y2X0 877 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 USH1CQ9Y6N9 552 aa18.04■□□□□ 0.48
SMC4-211ENST00000469858 ATXN2Q99700 1313 aaKnown RBP18.03■□□□□ 0.48
SMC4-211ENST00000469858 NIPSNAP2O75323 286 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 CA5AP35218 305 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 SLC26A3P40879 764 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 PTGER3P43115 390 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 ARHGEF7Q14155 803 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 ZNF234Q14588 700 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 CHRNA6Q15825 494 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 ZNF805Q5CZA5 627 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 LIPMQ5VYY2 423 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 NAPRTQ6XQN6 538 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 CERS6Q6ZMG9 384 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 CBARPQ8N350 705 aaPredicted RBP18.03■□□□□ 0.48
SMC4-211ENST00000469858 CCT6BQ92526 530 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 LRIG1Q96JA1 1093 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 LMCD1Q9NZU5 365 aa18.03■□□□□ 0.48
SMC4-211ENST00000469858 TSPAN11A1L157 253 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UPK3BL1B0FP48 263 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UPK3BL2E5RIL1 263 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 DLX3O60479 287 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 C1SP09871 688 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UGT1A6P19224 532 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 TFEBP19484 476 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UGT1A1P22309 533 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UGT1A4P22310 534 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UGT1A3P35503 534 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 UGT1A5P35504 534 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 LTBRP36941 435 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 MTHFRP42898 656 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 ABCE1P61221 599 aaKnown RBP18.02■□□□□ 0.48
SMC4-211ENST00000469858 ACAP2Q15057 778 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 RFLNAQ6ZTI6 216 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms