RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 KXD1Q9BQD3 176 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 RHOXF2Q9BQY4 288 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF670Q9BS34 389 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 LRRC1Q9BTT6 524 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ASPSCR1Q9BZE9 553 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PLA2G2FQ9BZM2 168 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZYG11BQ9C0D3 744 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC39A8Q9C0K1 460 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 DDX47Q9H0S4 455 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 EPC1Q9H2F5 836 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 POMKQ9H5K3 350 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CATSPERBQ9H7T0 1116 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 RBM12Q9NTZ6 932 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CCM2LQ9NUG4 571 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 DUS2Q9NX74 493 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PLK2Q9NYY3 685 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CDH7Q9ULB5 785 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ARHGAP26Q9UNA1 814 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF148Q9UQR1 794 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF510Q9Y2H8 683 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 USP15Q9Y4E8 981 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 WNT6Q9Y6F9 365 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ADAMTS20P59510 1910 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 MYO9BQ13459 2157 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 MTCL1Q9Y4B5 1905 aaKnown RBP4.15□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF638Q14966 1978 aaKnown RBP4.15□□□□□ -1.74
TMEM39A-204ENST00000468545 E2F8A0AVK6 867 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TYW5A2RUC4 315 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 DRGXA6NNA5 263 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 NEDD8-MDP1E9PL57 170 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 F5H423 210 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CCDC188H7C350 402 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SGK1O00141 431 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 MCF2LO15068 1137 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 DCLK1O15075 740 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 KCNN4O15554 427 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TTI1O43156 1089 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LIASO43766 372 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 MFSD11O43934 449 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 NRP2O60462 931 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PHF2O75151 1096 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 NEBLO76041 1014 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SEC24DO94855 1032 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 OLFM2O95897 454 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 IFNB1P01574 187 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 IGLV3-27P01718 113 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RHOCP08134 193 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CELA3BP08861 270 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 POU2F2P09086 479 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 ZSCAN5DPP0CG00 497 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RBP3P10745 1247 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LAMP2P13473 410 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 MTHFD2P13995 350 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TGM2P21980 687 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RBL1P28749 1068 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 OR1E1P30953 314 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 GDI1P31150 447 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CHKAP35790 457 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 ACVRL1P37023 503 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 GPR3P46089 330 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 HCAR3P49019 387 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 VPS41P49754 854 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PAPOLAP51003 745 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RRADP55042 308 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CDH4P55283 916 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SCAPQ12770 1279 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC10A2Q12908 348 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 MTA1Q13330 715 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 BYSLQ13895 437 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 DPYSQ14117 519 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SPIDRQ14159 915 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TRIM25Q14258 630 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PCOLCEQ15113 449 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PPP1R7Q15435 360 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SIX1Q15475 284 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 ZNF77Q15935 545 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CCNG2Q16589 344 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TAZQ16635 292 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 MPPE1Q53F39 396 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 FAM133BQ5BKY9 247 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 RABGAP1LQ5R372 815 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 AGBL4Q5VU57 503 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 NCBP2-AS2Q69YL0 99 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC9A4Q6AI14 798 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 IL31Q6EBC2 164 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CCDC70Q6NSX1 233 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TTC27Q6P3X3 843 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 CCDC137Q6PK04 289 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 PARM1Q6UWI2 310 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 BBS12Q6ZW61 710 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 HTR3DQ70Z44 454 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LARP4Q71RC2 724 aaKnown RBP eCLIP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 TMEM25Q86YD3 366 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LYSMD2Q8IV50 215 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 SLC41A1Q8IVJ1 513 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 LGI4Q8N135 537 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 FAM71DQ8N9W8 422 aa4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 NOA1Q8NC60 698 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-204ENST00000468545 OR7D4Q8NG98 312 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms