RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CNGA2Q16280 664 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 B3GNTL1Q67FW5 361 aaPredicted RBP11.55□□□□□ -0.56
VPS26A-204ENST00000467852 KRT39Q6A163 491 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 FAAH2Q6GMR7 532 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 SLC9B2Q86UD5 537 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 BPHLQ86WA6 291 aaPredicted RBP11.55□□□□□ -0.56
VPS26A-204ENST00000467852 RAB43Q86YS6 212 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 HCAR2Q8TDS4 363 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 SEMA4DQ92854 862 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 ARHGEF2Q92974 986 aaKnown RBP11.55□□□□□ -0.56
VPS26A-204ENST00000467852 ZSCAN31Q96LW9 406 aaPredicted RBP11.55□□□□□ -0.56
VPS26A-204ENST00000467852 GDAP1L1Q96MZ0 367 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 TGM7Q96PF1 710 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 MED15Q96RN5 788 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 ZBTB20Q9HC78 741 aaPredicted RBP11.55□□□□□ -0.56
VPS26A-204ENST00000467852 MPP6Q9NZW5 540 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 SERTAD1Q9UHV2 236 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 SH3BGRL2Q9UJC5 107 aa11.55□□□□□ -0.56
VPS26A-204ENST00000467852 FAM171A2A8MVW0 826 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 PCDH17O14917 1159 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 IGHEP01854 428 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 NR3C1P04150 777 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 INHBBP09529 407 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 MMP12P39900 470 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 ADAM8P78325 824 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 ADORA2A-AS1P86434 159 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 NME3Q13232 169 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 ZNF169Q14929 603 aaPredicted RBP11.54□□□□□ -0.56
VPS26A-204ENST00000467852 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 CFAP58Q5T655 872 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 INTS8Q75QN2 995 aaKnown RBP11.54□□□□□ -0.56
VPS26A-204ENST00000467852 PDILTQ8N807 584 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 FBXL13Q8NEE6 735 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 TFAP2BQ92481 460 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 NRGNQ92686 78 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 CLIC6Q96NY7 704 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 IP6K3Q96PC2 410 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 TBC1D10AQ9BXI6 508 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 FRMD8Q9BZ67 464 aaPredicted RBP11.54□□□□□ -0.56
VPS26A-204ENST00000467852 CHST8Q9H2A9 424 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 THAP9Q9H5L6 903 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 RAB20Q9NX57 234 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 HPCAL4Q9UM19 191 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 SRPRBQ9Y5M8 271 aaKnown RBP11.54□□□□□ -0.56
VPS26A-204ENST00000467852 SEC16AO15027 2179 aa11.54□□□□□ -0.56
VPS26A-204ENST00000467852 MAPK13O15264 365 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 CPNE3O75131 537 aaKnown RBP11.53□□□□□ -0.56
VPS26A-204ENST00000467852 IGSF6O95976 241 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 IVLP07476 585 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 PAEPP09466 180 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 ETFBP38117 255 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 GCGRP47871 477 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 NASPP49321 788 aaPredicted RBP11.53□□□□□ -0.56
VPS26A-204ENST00000467852 TUBB3Q13509 450 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 HIF1AQ16665 826 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 CACHD1Q5VU97 1274 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 UNC13DQ70J99 1090 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 CNDP1Q96KN2 507 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 OR2M4Q96R27 311 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 NCAPGQ9BPX3 1015 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 NLNQ9BYT8 704 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 TTYH3Q9C0H2 523 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 KBTBD4Q9NVX7 518 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 CNOT8Q9UFF9 292 aaKnown RBP11.53□□□□□ -0.56
VPS26A-204ENST00000467852 FBXO2Q9UK22 296 aaPredicted RBP11.53□□□□□ -0.56
VPS26A-204ENST00000467852 ATP8A1Q9Y2Q0 1164 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 MFHAS1Q9Y4C4 1052 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 PCDHGC4Q9Y5F7 938 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 CSAG2Q9Y5P2 127 aa11.53□□□□□ -0.56
VPS26A-204ENST00000467852 RNF212BA8MTL3 300 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 ELFN1P0C7U0 828 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 AMD1P17707 334 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 PCSK6P29122 969 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 GTF2H1P32780 548 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 POLD2P49005 469 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 RPL34P49207 117 aaKnown RBP11.52□□□□□ -0.57
VPS26A-204ENST00000467852 GSDMDP57764 484 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 RBPJQ06330 500 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 CUL2Q13617 745 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 CNNM4Q6P4Q7 775 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 PRSS42Q7Z5A4 293 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 ZNF683Q8IZ20 524 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 DEFB106AQ8N104 65 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 TREX2Q9BQ50 279 aaPredicted RBP11.52□□□□□ -0.57
VPS26A-204ENST00000467852 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 TEX101Q9BY14 249 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 SLC17A4Q9Y2C5 497 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.57
VPS26A-204ENST00000467852 DOCK10Q96BY6 2186 aa11.52□□□□□ -0.57
VPS26A-204ENST00000467852 FOXO6A8MYZ6 492 aa11.51□□□□□ -0.57
VPS26A-204ENST00000467852 K7ELQ4 463 aaPredicted RBP11.51□□□□□ -0.57
VPS26A-204ENST00000467852 PEX12O00623 359 aa11.51□□□□□ -0.57
VPS26A-204ENST00000467852 PDXKO00764 312 aa11.51□□□□□ -0.57
VPS26A-204ENST00000467852 SRGAP2O75044 1071 aa11.51□□□□□ -0.57
VPS26A-204ENST00000467852 SLC2A4P14672 509 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms