RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 IP6K2Q9UHH9 426 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 ANAPC7Q9UJX3 599 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 PCDHGA3Q9Y5H0 932 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 BSNQ9UPA5 3926 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 A0A0J9YYE9 177 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 INPP4BO15327 924 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 MFSD11O43934 449 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 FZD6O60353 706 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 TRBC1P01850 177 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 PYGLP06737 847 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 ZNF30P17039 623 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 ITGB6P18564 788 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 SSR1P43307 286 aaKnown RBP17.16■□□□□ 0.34
TRIM56-203ENST00000467847 NFKB2Q00653 900 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 MMRN1Q13201 1228 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 LRP8Q14114 963 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 CCDC122Q5T0U0 273 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 ZNF765Q7L2R6 523 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 HTR3CQ8WXA8 447 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 NKD1Q969G9 470 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 AHCYL2Q96HN2 611 aaKnown RBP17.16■□□□□ 0.34
TRIM56-203ENST00000467847 AGAP2Q99490 1192 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 NUP85Q9BW27 656 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 TMEM9Q9P0T7 183 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 TTLL3Q9Y4R7 772 aa17.16■□□□□ 0.34
TRIM56-203ENST00000467847 UBR5O95071 2799 aaPredicted RBP17.16■□□□□ 0.34
TRIM56-203ENST00000467847 COL12A1Q99715 3063 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 TRBV23OR9-2A0A075B6M9 112 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 SERPINC1P01008 464 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 CD48P09326 243 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 IL4RP24394 825 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 GARSP41250 739 aaKnown RBP17.15■□□□□ 0.34
TRIM56-203ENST00000467847 ZNF165P49910 485 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 ARSDP51689 593 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 STC1P52823 247 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 GPLD1P80108 840 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 DSC2Q02487 901 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 FIGNQ5HY92 759 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 COLEC12Q5KU26 742 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 HGSNATQ68CP4 663 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 ATG14Q6ZNE5 492 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 NLRP8Q86W28 1048 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 ZNF761Q86XN6 746 aaPredicted RBP17.15■□□□□ 0.34
TRIM56-203ENST00000467847 FAM129CQ86XR2 697 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 IL22RA1Q8N6P7 574 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 EXD1Q8NHP7 514 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 SLC37A2Q8TED4 501 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 SLC38A3Q99624 504 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 FUCA2Q9BTY2 467 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 RIOK2Q9BVS4 552 aaKnown RBP17.15■□□□□ 0.34
TRIM56-203ENST00000467847 DDA1Q9BW61 102 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 HAUS2Q9NVX0 235 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 SLC39A1Q9NY26 324 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 DNPEPQ9ULA0 475 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 CHKBQ9Y259 395 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 B3GALT1Q9Y5Z6 326 aa17.15■□□□□ 0.34
TRIM56-203ENST00000467847 BZW2Q9Y6E2 419 aaKnown RBP17.15■□□□□ 0.34
TRIM56-203ENST00000467847 PTPN13Q12923 2485 aa17.14■□□□□ 0.34
TRIM56-203ENST00000467847 MATN3O15232 486 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 ASMTLO95671 621 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 CA4P22748 312 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 CES1P23141 567 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 UGT1A3P35503 534 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 FASLGP48023 281 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 GALNT2Q10471 571 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 NR1I3Q14994 352 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 CLCA4Q14CN2 919 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 HADHQ16836 314 aaKnown RBP17.14■□□□□ 0.33
TRIM56-203ENST00000467847 ALG1LQ6GMV1 187 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 TIGD7Q6NT04 549 aaPredicted RBP17.14■□□□□ 0.33
TRIM56-203ENST00000467847 TMEM71Q6P5X7 295 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 NRSN1Q8IZ57 195 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 SFRP1Q8N474 314 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 OR10G6Q8NH81 332 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 MAML1Q92585 1016 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 COX14Q96I36 57 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 SLC12A9Q9BXP2 914 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 TDRD1Q9BXT4 1180 aaKnown RBP17.14■□□□□ 0.33
TRIM56-203ENST00000467847 ASPSCR1Q9BZE9 553 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 RBM22Q9NW64 420 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRIM56-203ENST00000467847 OCIAD1Q9NX40 245 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 ZNHIT2Q9UHR6 403 aa17.14■□□□□ 0.33
TRIM56-203ENST00000467847 EFCAB7A8K855 629 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 B4E171 279 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 MYO1FO00160 1098 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 DUX1O43812 170 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 PPFIA2O75334 1257 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 MAP3K6O95382 1288 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 EML2O95834 649 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 ATP1A1P05023 1023 aaKnown RBP17.13■□□□□ 0.33
TRIM56-203ENST00000467847 CYP1A2P05177 515 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 LIFP15018 202 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 GJC1P36383 396 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 TSPAN7P41732 249 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 RAB15P59190 212 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 DPYSL3Q14195 570 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 IHHQ14623 411 aa17.13■□□□□ 0.33
TRIM56-203ENST00000467847 PAFAH1B3Q15102 231 aaKnown RBP17.13■□□□□ 0.33
TRIM56-203ENST00000467847 IFI16Q16666 785 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms