RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 A0A1B0GUH1 482 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 PMM2O15305 246 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 C9P02748 559 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 DRD2P14416 443 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 SLC2A4P14672 509 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 TYRP1P17643 537 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 RRADP55042 308 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 LAMB3Q13751 1172 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 LRP8Q14114 963 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 CYTH1Q15438 398 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 CCDC40Q4G0X9 1142 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 PYCR3Q53H96 274 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 VWA2Q5GFL6 755 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 MIIPQ5JXC2 388 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 TMCO4Q5TGY1 634 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 MED25Q71SY5 747 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 GLIS1Q8NBF1 620 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 INPP5DQ92835 1189 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 CFAP57Q96MR6 1250 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 RETREG1Q9H6L5 497 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 PDE7BQ9NP56 450 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 UBE2TQ9NPD8 197 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-203ENST00000467533 CHST11Q9NPF2 352 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 KCTD5Q9NXV2 234 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 TMEM63CQ9P1W3 806 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 B4GALT6Q9UBX8 382 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 RARRES3Q9UL19 164 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 SNX7Q9UNH6 387 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 NEU3Q9UQ49 428 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 TMEM98Q9Y2Y6 226 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 DNHD1Q96M86 4753 aa10.14□□□□□ -0.79
HDAC3-203ENST00000467533 FAM170AA1A519 330 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 TRIM49BA6NDI0 452 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 LILRA5A6NI73 299 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 FAM72CH0Y354 149 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 E2F3O00716 465 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 TOX3O15405 576 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-203ENST00000467533 P4HA2O15460 535 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 SNX2O60749 519 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 LRIG2O94898 1065 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 CD1EP15812 388 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 AMD1P17707 334 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 SSTR2P30874 369 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 FLT3P36888 993 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 ETV3P41162 512 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 GPR1P46091 355 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 VAV2P52735 878 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 POLR2LP62875 67 aaKnown RBP10.13□□□□□ -0.79
HDAC3-203ENST00000467533 NRG1Q02297 640 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-203ENST00000467533 BCL2L1Q07817 233 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 TUBB3Q13509 450 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 CNGA3Q16281 694 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 FAM72AQ5TYM5 149 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 FAM72DQ6L9T8 149 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 PWWP2BQ6NUJ5 590 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 TRIM74Q86UV6 250 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 KCNMB4Q86W47 210 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 FAM72BQ86X60 149 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 TMEM102Q8N9M5 508 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-203ENST00000467533 EHBP1Q8NDI1 1231 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 ADAMTS17Q8TE56 1095 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 MR1Q95460 341 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 DTD2Q96FN9 168 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 SCARF2Q96GP6 870 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-203ENST00000467533 SGSM3Q96HU1 749 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 BARD1Q99728 777 aaKnown RBP10.13□□□□□ -0.79
HDAC3-203ENST00000467533 HERPUD2Q9BSE4 406 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 TBC1D29Q9UFV1 150 aa10.13□□□□□ -0.79
HDAC3-203ENST00000467533 POLEQ07864 2286 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 GOLGA8SH3BPF8 625 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 PRICKLE3O43900 615 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-203ENST00000467533 UBXN7O94888 489 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 ALPPP05187 535 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 EDN3P14138 238 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 TEAD1P28347 426 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 HTR1EP28566 365 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 PMS1P54277 932 aaKnown RBP10.12□□□□□ -0.79
HDAC3-203ENST00000467533 ATP11AP98196 1134 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 LLGL1Q15334 1064 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 CDO1Q16878 200 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 CRB2Q5IJ48 1285 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 CACHD1Q5VU97 1274 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 IYDQ6PHW0 289 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 BNC2Q6ZN30 1099 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-203ENST00000467533 FAM92BQ6ZTR7 304 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 CHST15Q7LFX5 561 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-203ENST00000467533 PRSS42Q7Z5A4 293 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 SRLQ86TD4 932 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 CUZD1Q86UP6 607 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 PARP9Q8IXQ6 854 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 ARFGAP1Q8N6T3 406 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 AVL9Q8NBF6 648 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 NANOS1Q8WY41 292 aaKnown RBP10.12□□□□□ -0.79
HDAC3-203ENST00000467533 TM9SF4Q92544 642 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 HDAC11Q96DB2 347 aa10.12□□□□□ -0.79
HDAC3-203ENST00000467533 ECHDC3Q96DC8 303 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms