RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 AGAP2Q99490 1192 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 SNRNP25Q9BV90 132 aaKnown RBP12.11□□□□□ -0.47
UBR4-211ENST00000467272 TMEM98Q9Y2Y6 226 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
UBR4-211ENST00000467272 A0A0U1RQS6 177 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 MAFKO60675 156 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 MAP3K6O95382 1288 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 CPP00450 1065 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 C9P02748 559 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 NR1D1P20393 614 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 HSPA9P38646 679 aaKnown RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 MLLT10P55197 1068 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 UBE2HP62256 183 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 TPD52L1Q16890 204 aaPredicted RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 CT47A1Q5JQC4 288 aaPredicted RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 ERMARDQ5T6L9 678 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 RAET1GQ6H3X3 334 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 PLEKHA7Q6IQ23 1121 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 ESX1Q8N693 406 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 SCAMP4Q969E2 229 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 SMIM14Q96QK8 99 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 WDR24Q96S15 920 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 AGPAT1Q99943 283 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 SUDS3Q9H7L9 328 aaPredicted RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 NLRC4Q9NPP4 1024 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 CWC15Q9P013 229 aaKnown RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 PLEKHB1Q9UF11 243 aaPredicted RBP12.1□□□□□ -0.47
UBR4-211ENST00000467272 TBC1D29Q9UFV1 150 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 PCDHGA6Q9Y5G7 932 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 FBN2P35556 2912 aa12.1□□□□□ -0.47
UBR4-211ENST00000467272 TMEM191CA6NGB0 347 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 DFFAO00273 331 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 PDHA1P08559 390 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 KRT7P08729 469 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 RNF224P0DH78 156 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 CYP2A6P11509 494 aaPredicted RBP12.09□□□□□ -0.47
UBR4-211ENST00000467272 ZNF28P17035 718 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 TCN2P20062 427 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 UQCRFS1P47985 274 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 ZNF135P52742 658 aaPredicted RBP12.09□□□□□ -0.47
UBR4-211ENST00000467272 UBE2IP63279 158 aaKnown RBP12.09□□□□□ -0.47
UBR4-211ENST00000467272 LAMB3Q13751 1172 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 KRT31Q15323 416 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 ALG1LQ6GMV1 187 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 ACAD10Q6JQN1 1059 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 APLFQ8IW19 511 aaPredicted RBP12.09□□□□□ -0.47
UBR4-211ENST00000467272 NRSN1Q8IZ57 195 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 LZTR1Q8N653 840 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 TEX26Q8N6G2 289 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 GALNT11Q8NCW6 608 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 SLC38A3Q99624 504 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 EPB41L1Q9H4G0 881 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
UBR4-211ENST00000467272 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 SP110Q9HB58 689 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 MLXIPLQ9NP71 852 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 ETNK2Q9NVF9 386 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 TAS2R14Q9NYV8 317 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 VPS18Q9P253 973 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 ADGRG1Q9Y653 693 aa12.09□□□□□ -0.47
UBR4-211ENST00000467272 OAS3Q9Y6K5 1087 aaKnown RBP12.09□□□□□ -0.47
UBR4-211ENST00000467272 TRBV23OR9-2A0A075B6M9 112 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 LILRA5A6NI73 299 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 A8MU76 341 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 POLR1CO15160 346 aaPredicted RBP12.08□□□□□ -0.48
UBR4-211ENST00000467272 MIPP30301 263 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 MAN1A1P33908 653 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 GPR1P46091 355 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 CLCNKAP51800 687 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 STC1P52823 247 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 PMS2P54278 862 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 HHEXQ03014 270 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 DOK6Q6PKX4 331 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 ATCAYQ86WG3 371 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 GALNT13Q8IUC8 556 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 CCDC13Q8IYE1 715 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 AP2M1Q96CW1 435 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 LYSMD1Q96S90 227 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 TRIM7Q9C029 511 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 LRRC4CQ9HCJ2 640 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 PRDM8Q9NQV8 689 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 CD84Q9UIB8 345 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 TLK1Q9UKI8 766 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 APCP25054 2843 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
UBR4-211ENST00000467272 A0A0J9YYE9 177 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 ANKRD62A6NC57 917 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 WIPF3A6NGB9 483 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 TOX3O15405 576 aaPredicted RBP12.07□□□□□ -0.48
UBR4-211ENST00000467272 LRCH4O75427 683 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms