RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SLIT2O94813 1529 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 NEXMIFQ5QGS0 1516 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 CEP350Q5VT06 3117 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 ADGRB2O60241 1585 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 CDC42BPGQ6DT37 1551 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 FMN2Q9NZ56 1722 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 FAM157AC9JC47 383 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 IL1AP01583 271 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 CD72P21854 359 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 CLK1P49759 484 aaKnown RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 TAF5Q15542 800 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 ME3Q16798 604 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 SLC35E4Q6ICL7 350 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 CCNI2Q6ZMN8 369 aaPredicted RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 SHFQ7M4L6 423 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 SUGP1Q8IWZ8 645 aaKnown RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 CEP70Q8NHQ1 597 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 CCT6BQ92526 530 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 ARPC5LQ9BPX5 153 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 TTC12Q9H892 705 aaPredicted RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 WDR6Q9NNW5 1121 aaKnown RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 NOX4Q9NPH5 578 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 ATP8A2Q9NTI2 1148 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 SLC9A2Q9UBY0 812 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 TP53TG3Q9ULZ0 132 aa3.59□□□□□ -1.83
XRN1-206ENST00000467077 RRP7AQ9Y3A4 280 aaKnown RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 LRPPRCP42704 1394 aaKnown RBP3.59□□□□□ -1.83
XRN1-206ENST00000467077 CLTCL1P53675 1640 aa3.59□□□□□ -1.84
XRN1-206ENST00000467077 COL14A1Q05707 1796 aaKnown RBP3.58□□□□□ -1.84
XRN1-206ENST00000467077 AGRNO00468 2067 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 MID1O15344 667 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 IRAK2O43187 625 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 NBNO60934 754 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 TCEA3O75764 348 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 ADAP00813 363 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 SERPINC1P01008 464 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 IGLV1-44P01699 117 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 HNF1BP35680 557 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 LPIN1Q14693 890 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 FBXO43Q4G163 708 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 ZC3HC1Q86WB0 502 aaKnown RBP3.58□□□□□ -1.84
XRN1-206ENST00000467077 HERC6Q8IVU3 1022 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 GHDCQ8N2G8 530 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 CREB3L4Q8TEY5 395 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 TBC1D20Q96BZ9 403 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 LRR1Q96L50 414 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 PSMD1Q99460 953 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 CDK19Q9BWU1 502 aa3.58□□□□□ -1.84
XRN1-206ENST00000467077 FAF1Q9UNN5 650 aaPredicted RBP3.58□□□□□ -1.84
XRN1-206ENST00000467077 GOLGB1Q14789 3259 aaKnown RBP3.58□□□□□ -1.84
XRN1-206ENST00000467077 HFM1A2PYH4 1435 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 NUP155O75694 1391 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 CNPP09543 421 aaKnown RBP3.57□□□□□ -1.84
XRN1-206ENST00000467077 CTPS1P17812 591 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 MYOM1P52179 1685 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 ARL4CP56559 192 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 RELQ04864 619 aaPredicted RBP3.57□□□□□ -1.84
XRN1-206ENST00000467077 SLC18A2Q05940 514 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 CAPSQ13938 189 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 ANKRD45Q5TZF3 282 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 KNDC1Q76NI1 1749 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 C2CD5Q86YS7 1000 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 NKAPQ8N5F7 415 aaKnown RBP3.57□□□□□ -1.84
XRN1-206ENST00000467077 SPATA5Q8NB90 893 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 MCPH1Q8NEM0 835 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 ART5Q96L15 291 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 COG8Q96MW5 612 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 NOD2Q9HC29 1040 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 ITM2CQ9NQX7 267 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 KLHL1Q9NR64 748 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 THSD7AQ9UPZ6 1657 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 CNPY2Q9Y2B0 182 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 GDAQ9Y2T3 454 aa3.57□□□□□ -1.84
XRN1-206ENST00000467077 SBF2Q86WG5 1849 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 CCDC144AA2RUR9 1427 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 NAIPQ13075 1403 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 ARHGEF9O43307 516 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 ANP32CO43423 234 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 SLC25A17O43808 307 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 DNAH10OSP0CZ25 163 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 CENPAP49450 140 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 PAPOLAP51003 745 aaKnown RBP3.56□□□□□ -1.84
XRN1-206ENST00000467077 ARSFP54793 590 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 SLC8A3P57103 927 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 ANKRD1Q15327 319 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 SLC18A3Q16572 532 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 GRAMD1BQ3KR37 738 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 AMZ1Q400G9 498 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 DENND6AQ8IWF6 608 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 DNAAF1Q8NEP3 725 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 ZMIZ2Q8NF64 920 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 RASSF8Q8NHQ8 419 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 MORC4Q8TE76 937 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 HSPH1Q92598 858 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 SH3KBP1Q96B97 665 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 LINC00479Q96M42 142 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 LMAN2LQ9H0V9 348 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 STN1Q9H668 368 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms