RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GOLGA8CPA6NN73 597 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 FADS2P1A8MWK0 482 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 K7ESM1 405 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 GPR39O43194 453 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 LILRB5O75023 590 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 PRAMEF1O95521 474 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 PAK4O96013 591 aaPredicted RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 GOT2P00505 430 aaKnown RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 TEAD1P28347 426 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 MAT2AP31153 395 aaKnown RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 MC4RP32245 332 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 IGFALSP35858 605 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 PMS2P54278 862 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 RPL6Q02878 288 aaKnown RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 BRD3Q15059 726 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 IRF4Q15306 451 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 CHRNA6Q15825 494 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 LONRF1Q17RB8 773 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 SETMARQ53H47 684 aaPredicted RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 ALS2CLQ60I27 953 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 FAM151BQ6UXP7 276 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 CYS1Q717R9 158 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 TRMT10CQ7L0Y3 403 aaKnown RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 MREGQ8N565 214 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 TMEM145Q8NBT3 493 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
VCP-204ENST00000466100 PLA2G15Q8NCC3 412 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 GSDMBQ8TAX9 411 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 AP2M1Q96CW1 435 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 TTC25Q96NG3 672 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 AGAP2Q99490 1192 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 LRFN3Q9BTN0 628 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 RIOK2Q9BVS4 552 aaKnown RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 C1QTNF1Q9BXJ1 281 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 DUSP15Q9H1R2 295 aaPredicted RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 FAM83DQ9H4H8 585 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 MBNL1Q9NR56 388 aaKnown RBP11.09□□□□□ -0.63
VCP-204ENST00000466100 SMOXQ9NWM0 555 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 KCTD5Q9NXV2 234 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 IL1RAPL1Q9NZN1 696 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 APPL1Q9UKG1 709 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 SLCO1B1Q9Y6L6 691 aa11.09□□□□□ -0.63
VCP-204ENST00000466100 ZNF292O60281 2723 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 TCRBV9S1A1TA0A576 114 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 METTL12A8MUP2 240 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 RIPK2O43353 540 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 HRO43593 1189 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 NDUFS2O75306 463 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 SPAG6O75602 509 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 SRP72O76094 671 aaKnown RBP11.08□□□□□ -0.64
VCP-204ENST00000466100 FSBPO95073 299 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 VAPBO95292 243 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 ABHD2P08910 425 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PRSS56P0CW18 603 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 H2AFXP16104 143 aaPredicted RBP11.08□□□□□ -0.64
VCP-204ENST00000466100 NUDT1P36639 197 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PRAMEP78395 509 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 NFATC2Q13469 925 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 SEMA3AQ14563 771 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 LRRC14Q15048 493 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 ATP13A5Q4VNC0 1218 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PMS2CLQ68D20 193 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PDPK2PQ6A1A2 396 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PSAPL1Q6NUJ1 521 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 ZNF449Q6P9G9 518 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 AFTPHQ6ULP2 937 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 ADAMTSL4Q6UY14 1074 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 KDM7AQ6ZMT4 941 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 GCNT7Q6ZNI0 430 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 CNTN4Q8IWV2 1026 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PALM2Q8IXS6 379 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 PIANPQ8IYJ0 282 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 TRAM1L1Q8N609 369 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 GPR150Q8NGU9 434 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 C1orf216Q8TAB5 229 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 HNRNPLLQ8WVV9 542 aaKnown RBP11.08□□□□□ -0.64
VCP-204ENST00000466100 CERS2Q96G23 380 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 ZSCAN5AQ9BUG6 496 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 FZD3Q9NPG1 666 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 SMYD2Q9NRG4 433 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 MARCH4Q9P2E8 410 aaPredicted RBP11.08□□□□□ -0.64
VCP-204ENST00000466100 CNOT6Q9ULM6 557 aaKnown RBP11.08□□□□□ -0.64
VCP-204ENST00000466100 DMTF1Q9Y222 760 aa11.08□□□□□ -0.64
VCP-204ENST00000466100 FNDC3AQ9Y2H6 1198 aaKnown RBP11.08□□□□□ -0.64
VCP-204ENST00000466100 TMEM131Q92545 1883 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UQCRHLA0A096LP55 91 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 A0A1W2PPC4 97 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 FAM159BA6NKW6 160 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 GOLGA8KD6RF30 607 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 GOLGA8TH3BQL2 631 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 SLC31A1O15431 190 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A9O60656 530 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 ACSL3O95573 720 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UQCRHP07919 91 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 ERVK-10P10266 1014 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 PAMP19021 973 aa11.07□□□□□ -0.64
VCP-204ENST00000466100 UGT1A6P19224 532 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms