RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PDZD8Q8NEN9 1154 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 IL12RB2Q99665 862 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 CGREF1Q99674 301 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 FUNDC2Q9BWH2 189 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 COLEC11Q9BWP8 271 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 FSD1LQ9BXM9 530 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 ALG9Q9H6U8 611 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 GPRC5DQ9NZD1 345 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 AURKAO14965 403 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 B4GAT1O43505 415 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 LRIG2O94898 1065 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 NPPAP01160 153 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 ALPLP05186 524 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 CDH1P12830 882 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 RPS12P25398 132 aaKnown RBP19.67■□□□□ 0.74
SDF4-205ENST00000465727 SHMT2P34897 504 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 RCAN2Q14206 197 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 TBPL2Q6SJ96 375 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 R3HCC1LQ7Z5L2 792 aaKnown RBP19.67■□□□□ 0.74
SDF4-205ENST00000465727 RAB44Q7Z6P3 723 aaPredicted RBP19.67■□□□□ 0.74
SDF4-205ENST00000465727 ISCA2Q86U28 154 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 IFNEQ86WN2 208 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 ANKRD13BQ86YJ7 626 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 CADM3Q8N126 398 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 ANKRD49Q8WVL7 239 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 DDIT4Q9NX09 232 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 WARS2Q9UGM6 360 aaKnown RBP19.67■□□□□ 0.74
SDF4-205ENST00000465727 UGT2B11O75310 529 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 EEDO75530 441 aaKnown RBP19.67■□□□□ 0.74
SDF4-205ENST00000465727 CDK14O94921 469 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 CHRM3P20309 590 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 TOP3AQ13472 1001 aaPredicted RBP19.67■□□□□ 0.74
SDF4-205ENST00000465727 GRB7Q14451 532 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 SPCS2Q15005 226 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 GEN1Q17RS7 908 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 Q3C1V9 767 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 PM20D1Q6GTS8 502 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 SLC27A1Q6PCB7 646 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 ALKAL1Q6UXT8 129 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 CLEC20AQ6ZU45 233 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 SPATA19Q7Z5L4 167 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 RIMKLAQ8IXN7 391 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 MUL1Q969V5 352 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 BIRC7Q96CA5 298 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 TUBGCP3Q96CW5 907 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 ADNPQ9H2P0 1102 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 WDCPQ9H6R7 721 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 MAGEL2Q9UJ55 1249 aa19.67■□□□□ 0.74
SDF4-205ENST00000465727 PFDN6O15212 129 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 HUS1O60921 280 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 JRKO75564 520 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 RSL1D1O76021 490 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 BEST1O76090 585 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 TXNP10599 105 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 PABPC1P11940 636 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 HGFP14210 728 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 TSPAN8P19075 237 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 WARSP23381 471 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 TAF6P49848 677 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 RAD23AP54725 363 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 DAOAP59103 153 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 SV2CQ496J9 727 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 RABL3Q5HYI8 236 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 OTUD3Q5T2D3 398 aaPredicted RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 RANBP10Q6VN20 620 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 SLC16A12Q6ZSM3 486 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 FKBP9P1Q75LS8 142 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 ITIH5Q86UX2 942 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 ATPAF2Q8N5M1 289 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 DNAJB14Q8TBM8 379 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 COPS5Q92905 334 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 DCPSQ96C86 337 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 CELF6Q96J87 481 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 MID1IP1Q9NPA3 183 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 LEF1Q9UJU2 399 aaPredicted RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 GPR45Q9Y5Y3 372 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 SPTLC1O15269 473 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 NCK1P16333 377 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 ITIH1P19827 911 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 YBX1P67809 324 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 CD300CQ08708 224 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 AQP6Q13520 282 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 NOL9Q5SY16 702 aaKnown RBP19.66■□□□□ 0.74
SDF4-205ENST00000465727 RNF145Q96MT1 663 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 NTN4Q9HB63 628 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 CNGB3Q9NQW8 809 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 TMEM45AQ9NWC5 275 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 POLG2Q9UHN1 485 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 BAG5Q9UL15 447 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 PDE10AQ9Y233 779 aa19.66■□□□□ 0.74
SDF4-205ENST00000465727 BPTFQ12830 3046 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 OXSR1O95747 527 aaPredicted RBP19.65■□□□□ 0.74
SDF4-205ENST00000465727 ENO2P09104 434 aaPredicted RBP19.65■□□□□ 0.74
SDF4-205ENST00000465727 NCAM1P13591 858 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 TGM1P22735 817 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 CXCR3P49682 368 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 CCNA1P78396 465 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 ZNF789Q5FWF6 425 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 PRR23BQ6ZRT6 265 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 CLEC4FQ8N1N0 589 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms