RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 NKIRAS2Q9NYR9 191 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 OGFRQ9NZT2 677 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CWC15Q9P013 229 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 COPG2Q9UBF2 871 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC9A2Q9UBY0 812 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ADD3Q9UEY8 706 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 NRBP1Q9UHY1 535 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 FBXW11Q9UKB1 542 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 RCOR1Q9UKL0 485 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 NENFQ9UMX5 172 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CMAHPQ9Y471 501 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 INSL5Q9Y5Q6 135 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SNX8Q9Y5X2 465 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SQORQ9Y6N5 450 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TMEM8BA6NDV4 472 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 MYMKA6NI61 221 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 AKR1B15C9JRZ8 316 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 FAM90A26D6RGX4 464 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 M0QZ24 198 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ATP2A1O14983 1001 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ADAMDEC1O15204 470 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 OGG1O15527 345 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SMAD6O43541 496 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 HS6ST1O60243 411 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 HNRNPCL1O60812 293 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 MITFO75030 526 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 TMCC2O75069 709 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ERAL1O75616 437 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RFPL2O75678 378 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 NTN1O95631 604 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ICAM1P05362 532 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RB1P06400 928 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SRPRAP08240 638 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 G6PDP11413 515 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 TRIM21P19474 475 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 STX2P32856 288 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ACTN2P35609 894 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RPL3P39023 403 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PRCPP42785 496 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 HSD17B4P51659 736 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SUOXP51687 545 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 GPR143P51810 404 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PNLIPRP2P54317 469 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SEC61A1P61619 476 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PSMC6P62333 389 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 CSNK2A1P68400 391 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 CXCL9Q07325 125 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ACSM2AQ08AH3 577 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SREBF2Q12772 1141 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 KIF5AQ12840 1032 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF155Q12901 538 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 STK4Q13043 487 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 CHAF1BQ13112 559 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 IKQ13123 557 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 BAATQ14032 418 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 BECN1Q14457 450 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 NAB2Q15742 525 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SYT16Q17RD7 645 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF260Q3ZCT1 412 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RAB6CQ53S08 254 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF805Q5CZA5 627 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RILPL1Q5EBL4 403 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PAPPA-AS1Q5QFB9 102 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 KRT79Q5XKE5 535 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 NSUN5P2Q63ZY6 315 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ACSM2BQ68CK6 577 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 FAM109BQ6ICB4 259 aaPredicted RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF280DQ6N043 979 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF549Q6P9A3 640 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ENOSF1Q7L5Y1 443 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 KRT74Q7RTS7 529 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RBM23Q86U06 439 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SCML4Q8N228 414 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PGBD5Q8N414 524 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SRBD1Q8N5C6 995 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 IQCF1Q8N6M8 205 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 RBMXL3Q8N7X1 1067 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 IL17RCQ8NAC3 791 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC38A9Q8NBW4 561 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 CSNK2A3Q8NEV1 391 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 OR14A16Q8NHC5 309 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SPATA22Q8NHS9 363 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 NSMCE1Q8WV22 266 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 APBB2Q92870 758 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC22A18Q96BI1 424 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 ELMOD3Q96FG2 381 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SCMH1Q96GD3 660 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC22A12Q96S37 553 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 GFI1Q99684 422 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 NCAPGQ9BPX3 1015 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SRSF8Q9BRL6 282 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PCGF1Q9BSM1 259 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 SF3B5Q9BWJ5 86 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 TEX12Q9BXU0 123 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 FTOQ9C0B1 505 aaKnown RBP eCLIP1.91□□□□□ -2.16e-7■□□□□ 10.3
NUCKS1-202ENST00000464938 RAB6CQ9H0N0 254 aa1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PPIL3Q9H2H8 161 aaKnown RBP1.91□□□□□ -2.1
NUCKS1-202ENST00000464938 PLK3Q9H4B4 646 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms