RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 GNLYP22749 145 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 LHCGRP22888 699 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 FOXM1Q08050 763 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 SLC10A7Q0GE19 358 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 LRP8Q14114 963 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 ZNF235Q14590 738 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 PYCR3Q53H96 274 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-224ENST00000464148 TMCO4Q5TGY1 634 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 TRIM74Q86UV6 250 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 ARHGAP12Q8IWW6 846 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 CBARPQ8N350 705 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-224ENST00000464148 FNIP1Q8TF40 1166 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 SH3KBP1Q96B97 665 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 RNF31Q96EP0 1072 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 ULBP3Q9BZM4 244 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 NUP62CLQ9H1M0 184 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 GANQ9H2C0 597 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-224ENST00000464148 ZNHIT2Q9UHR6 403 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 POLHQ9Y253 713 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 SPTBN1Q01082 2364 aaKnown RBP13.21□□□□□ -0.3
MRPL55-224ENST00000464148 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-224ENST00000464148 RFPL1O75677 317 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 ASMTLO95671 621 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 EML2O95834 649 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 ERCC2P18074 760 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 F8A1P23610 371 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 JAM2P57087 298 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 DPTQ07507 201 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 MAP7Q14244 749 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 CA9Q16790 459 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 PPP6R3Q5H9R7 873 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-224ENST00000464148 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-224ENST00000464148 ADAMTSL4Q6UY14 1074 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 USP45Q70EL2 814 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 MON1BQ7L1V2 547 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 TSPAN33Q86UF1 283 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 SSC4DQ8WTU2 575 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 AP2M1Q96CW1 435 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 SCRN2Q96FV2 425 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 SARS2Q9NP81 518 aaKnown RBP13.2□□□□□ -0.3
MRPL55-224ENST00000464148 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 CNOT8Q9UFF9 292 aaKnown RBP13.2□□□□□ -0.3
MRPL55-224ENST00000464148 CROTQ9UKG9 612 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 TLK1Q9UKI8 766 aa13.2□□□□□ -0.3
MRPL55-224ENST00000464148 SYCE3A1L190 88 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 INPP4BO15327 924 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 CTPS1P17812 591 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 TNFAIP3P21580 790 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 EEF1GP26641 437 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 HSPA9P38646 679 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 KLK7P49862 253 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 EPHA4P54764 986 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 PTPRRQ15256 657 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 TCP11X2Q5H9J9 407 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 CAPRIN2Q6IMN6 1127 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 CHST15Q7LFX5 561 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 SLC9B2Q86UD5 537 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 NPWQ8N729 165 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 GALNT11Q8NCW6 608 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 CPT1CQ8TCG5 803 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 STAMBPL1Q96FJ0 436 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 ZNF599Q96NL3 588 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 NUDCD1Q96RS6 583 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 TWSG1Q9GZX9 223 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 ABCG8Q9H221 673 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 NOD2Q9HC29 1040 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 PCSK1NQ9UHG2 260 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 PRKAB1Q9Y478 270 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 PRRC2CQ9Y520 2896 aaKnown RBP13.19□□□□□ -0.3
MRPL55-224ENST00000464148 ITPR2Q14571 2701 aa13.19□□□□□ -0.3
MRPL55-224ENST00000464148 ICE1Q9Y2F5 2266 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 A0A0U1RQS6 177 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 TCRBV5S1A1TA0A578 114 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 CDC14CA4D256 554 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 SNX2O60749 519 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 SOD1P00441 154 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 FURINP09958 794 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 SLC2A4P14672 509 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 ZNF28P17035 718 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 OGDHQ02218 1023 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 TRAF2Q12933 501 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 ARMC12Q5T9G4 340 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 GAS2L3Q86XJ1 694 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 RASGRP3Q8IV61 690 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 TP53INP2Q8IXH6 220 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 NDUFAF2Q8N183 169 aa13.18□□□□□ -0.3
MRPL55-224ENST00000464148 BBS5Q8N3I7 341 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms