RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 TCEA2Q15560 299 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 KCTD16Q68DU8 428 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 LVRNQ6Q4G3 990 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 SPRED1Q7Z699 444 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 SLC13A5Q86YT5 568 aaPredicted RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 RFX6Q8HWS3 928 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 CCDC50Q8IVM0 306 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 ARHGAP12Q8IWW6 846 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 FSTL5Q8N475 847 aaPredicted RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 GPR156Q8NFN8 814 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 C9orf43Q8TAL5 461 aaPredicted RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 ACTRT1Q8TDG2 376 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 ARHGEF2Q92974 986 aaKnown RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 NAP1L3Q99457 506 aaPredicted RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 CMKLR1Q99788 373 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 TUBB2BQ9BVA1 445 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 C2orf49Q9BVC5 232 aaPredicted RBP11.17□□□□□ -0.62
SSR3-202ENST00000463503 MUC3BQ9H195 1237 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 NDFIP2Q9NV92 336 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 ETNK2Q9NVF9 386 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 DNAI1Q9UI46 699 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 APPL1Q9UKG1 709 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 RNF215Q9Y6U7 377 aa11.17□□□□□ -0.62
SSR3-202ENST00000463503 F8P00451 2351 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 ZSCAN5CA6NGD5 496 aaPredicted RBP11.16□□□□□ -0.62
SSR3-202ENST00000463503 ARHGAP42A6NI28 874 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 ESPNB1AK53 854 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 MTSS1O43312 755 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 TSPAN6O43657 245 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 CST8O60676 142 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 CCL4P13236 92 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
SSR3-202ENST00000463503 HK3P52790 923 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 YPEL5P62699 121 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 PPARDQ03181 441 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 SLC20A2Q08357 652 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 ADCY2Q08462 1091 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 GALNT2Q10471 571 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 SGCGQ13326 291 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 XRCC4Q13426 336 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
SSR3-202ENST00000463503 ELOCQ15369 112 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 ALG11Q2TAA5 492 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 CERCAMQ5T4B2 595 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 FAXCQ5TGI0 409 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 SYT10Q6XYQ8 523 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 TFAP2DQ7Z6R9 452 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 SFTPA2Q8IWL1 248 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 NPWQ8N729 165 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 TP53I13Q8NBR0 393 aaPredicted RBP11.16□□□□□ -0.62
SSR3-202ENST00000463503 HDAC11Q96DB2 347 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
SSR3-202ENST00000463503 OLFM3Q96PB7 478 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 TSGA13Q96PP4 275 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 SLC39A8Q9C0K1 460 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 SEMA6CQ9H3T2 930 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 MBNL1Q9NR56 388 aaKnown RBP11.16□□□□□ -0.62
SSR3-202ENST00000463503 DTLQ9NZJ0 730 aa11.16□□□□□ -0.62
SSR3-202ENST00000463503 HACD1B0YJ81 288 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 RASA4BC9J798 803 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 AREL1O15033 823 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 RASA4O43374 803 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 KDELR3O43731 214 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 MFSD11O43934 449 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 ZMPSTE24O75844 475 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 ALPIP09923 528 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 RECQLP46063 649 aaPredicted RBP11.15□□□□□ -0.62
SSR3-202ENST00000463503 SERPINH1P50454 418 aaKnown RBP11.15□□□□□ -0.62
SSR3-202ENST00000463503 GEMIN4P57678 1058 aaKnown RBP11.15□□□□□ -0.62
SSR3-202ENST00000463503 IL10RBQ08334 325 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 SLC10A2Q12908 348 aaPredicted RBP11.15□□□□□ -0.62
SSR3-202ENST00000463503 PDK1Q15118 436 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 NOMO1Q15155 1222 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 AADACL2Q6P093 401 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 DRICH1Q6PGQ1 229 aaPredicted RBP11.15□□□□□ -0.62
SSR3-202ENST00000463503 OR6C4Q8NGE1 309 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 CASKIN2Q8WXE0 1202 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 P3H4Q92791 437 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 ABHD17AQ96GS6 310 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 ZNF599Q96NL3 588 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 CATSPER2Q96P56 530 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 HERPUD2Q9BSE4 406 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 CEP44Q9C0F1 390 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 HOMER3Q9NSC5 361 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 GPR34Q9UPC5 381 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 PCDHGA3Q9Y5H0 932 aa11.15□□□□□ -0.62
SSR3-202ENST00000463503 PRR19A6NJB7 356 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 C16orf96A6NNT2 1141 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PGRMC1O00264 195 aaKnown RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 TOR1BO14657 336 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PPP1R12AO14974 1030 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 DUX1O43812 170 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 CEP104O60308 925 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PRAMEF11O60813 436 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 CD160O95971 181 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PNLIPP16233 465 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 GLB1P16278 677 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms