RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ZNF487B1APH4 448 aa8.82□□□□□ -1
LDB1-203ENST00000461873 KCNK1O00180 336 aa8.82□□□□□ -1
LDB1-203ENST00000461873 NTN3O00634 580 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 STK10O94804 968 aaKnown RBP8.82□□□□□ -1
LDB1-203ENST00000461873 CLDN7O95471 211 aa8.82□□□□□ -1
LDB1-203ENST00000461873 ECEL1O95672 775 aa8.82□□□□□ -1
LDB1-203ENST00000461873 HLA-DQB2P05538 268 aa8.82□□□□□ -1
LDB1-203ENST00000461873 CEACAM5P06731 702 aa8.82□□□□□ -1
LDB1-203ENST00000461873 VCLP18206 1134 aa8.82□□□□□ -1
LDB1-203ENST00000461873 LHCGRP22888 699 aa8.82□□□□□ -1
LDB1-203ENST00000461873 CCKBRP32239 447 aa8.82□□□□□ -1
LDB1-203ENST00000461873 CSTF2P33240 577 aaKnown RBP eCLIP8.82□□□□□ -1
LDB1-203ENST00000461873 ADCY8P40145 1251 aa8.82□□□□□ -1
LDB1-203ENST00000461873 GPR3P46089 330 aa8.82□□□□□ -1
LDB1-203ENST00000461873 NR2C2P49116 596 aa8.82□□□□□ -1
LDB1-203ENST00000461873 ARSEP51690 589 aa8.82□□□□□ -1
LDB1-203ENST00000461873 CTBSQ01459 385 aa8.82□□□□□ -1
LDB1-203ENST00000461873 PTSQ03393 145 aa8.82□□□□□ -1
LDB1-203ENST00000461873 TLE3Q04726 772 aa8.82□□□□□ -1
LDB1-203ENST00000461873 PPIDQ08752 370 aaKnown RBP8.82□□□□□ -1
LDB1-203ENST00000461873 COL9A2Q14055 689 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 HLTFQ14527 1009 aaKnown RBP eCLIP8.82□□□□□ -1
LDB1-203ENST00000461873 ZNF569Q5MCW4 686 aa8.82□□□□□ -1
LDB1-203ENST00000461873 LRRC38Q5VT99 294 aa8.82□□□□□ -1
LDB1-203ENST00000461873 OGFOD3Q6PK18 319 aa8.82□□□□□ -1
LDB1-203ENST00000461873 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
LDB1-203ENST00000461873 CHST15Q7LFX5 561 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 SPRED1Q7Z699 444 aa8.82□□□□□ -1
LDB1-203ENST00000461873 SLC9B2Q86UD5 537 aa8.82□□□□□ -1
LDB1-203ENST00000461873 VSIG1Q86XK7 387 aa8.82□□□□□ -1
LDB1-203ENST00000461873 TRIM48Q8IWZ4 208 aa8.82□□□□□ -1
LDB1-203ENST00000461873 OR10G6Q8NH81 332 aa8.82□□□□□ -1
LDB1-203ENST00000461873 CCL4L1Q8NHW4 92 aa8.82□□□□□ -1
LDB1-203ENST00000461873 GDAP1Q8TB36 358 aa8.82□□□□□ -1
LDB1-203ENST00000461873 GPBAR1Q8TDU6 330 aa8.82□□□□□ -1
LDB1-203ENST00000461873 TFB1MQ8WVM0 346 aaKnown RBP8.82□□□□□ -1
LDB1-203ENST00000461873 SLC39A7Q92504 469 aa8.82□□□□□ -1
LDB1-203ENST00000461873 RAPGEF5Q92565 580 aa8.82□□□□□ -1
LDB1-203ENST00000461873 SCAMP4Q969E2 229 aa8.82□□□□□ -1
LDB1-203ENST00000461873 VOPP1Q96AW1 172 aa8.82□□□□□ -1
LDB1-203ENST00000461873 FAF2Q96CS3 445 aa8.82□□□□□ -1
LDB1-203ENST00000461873 RBM41Q96IZ5 413 aaKnown RBP8.82□□□□□ -1
LDB1-203ENST00000461873 CALR3Q96L12 384 aaKnown RBP8.82□□□□□ -1
LDB1-203ENST00000461873 CHP1Q99653 195 aa8.82□□□□□ -1
LDB1-203ENST00000461873 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 FRMD8Q9BZ67 464 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 ZFYVE1Q9HBF4 777 aa8.82□□□□□ -1
LDB1-203ENST00000461873 DTLQ9NZJ0 730 aa8.82□□□□□ -1
LDB1-203ENST00000461873 KLHL8Q9P2G9 620 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
LDB1-203ENST00000461873 SLC17A4Q9Y2C5 497 aa8.82□□□□□ -1
LDB1-203ENST00000461873 TMEM98Q9Y2Y6 226 aa8.82□□□□□ -1
LDB1-203ENST00000461873 LAMA5O15230 3695 aa8.82□□□□□ -1
LDB1-203ENST00000461873 TRBV23OR9-2A0A075B6M9 112 aa8.81□□□□□ -1
LDB1-203ENST00000461873 MACROD2A1Z1Q3 448 aa8.81□□□□□ -1
LDB1-203ENST00000461873 GOLGA6L6A8MZA4 724 aa8.81□□□□□ -1
LDB1-203ENST00000461873 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
LDB1-203ENST00000461873 TK2O00142 265 aa8.81□□□□□ -1
LDB1-203ENST00000461873 PSTPIP1O43586 416 aa8.81□□□□□ -1
LDB1-203ENST00000461873 DUX1O43812 170 aa8.81□□□□□ -1
LDB1-203ENST00000461873 FZD6O60353 706 aa8.81□□□□□ -1
LDB1-203ENST00000461873 SNX2O60749 519 aa8.81□□□□□ -1
LDB1-203ENST00000461873 ZRANB2O95218 330 aaKnown RBP eCLIP8.81□□□□□ -1
LDB1-203ENST00000461873 SLC25A14O95258 325 aaPredicted RBP8.81□□□□□ -1
LDB1-203ENST00000461873 FGF1P05230 155 aa8.81□□□□□ -1
LDB1-203ENST00000461873 COMTP21964 271 aa8.81□□□□□ -1
LDB1-203ENST00000461873 AK4P27144 223 aaPredicted RBP8.81□□□□□ -1
LDB1-203ENST00000461873 SLC5A2P31639 672 aa8.81□□□□□ -1
LDB1-203ENST00000461873 UGT1A5P35504 534 aa8.81□□□□□ -1
LDB1-203ENST00000461873 POLD2P49005 469 aa8.81□□□□□ -1
LDB1-203ENST00000461873 SPINT3P49223 89 aa8.81□□□□□ -1
LDB1-203ENST00000461873 ATP1A2P50993 1020 aa8.81□□□□□ -1
LDB1-203ENST00000461873 STC1P52823 247 aa8.81□□□□□ -1
LDB1-203ENST00000461873 MAZP56270 477 aaKnown RBP8.81□□□□□ -1
LDB1-203ENST00000461873 OR1D5P58170 312 aa8.81□□□□□ -1
LDB1-203ENST00000461873 GPLD1P80108 840 aa8.81□□□□□ -1
LDB1-203ENST00000461873 IFI35P80217 286 aaPredicted RBP8.81□□□□□ -1
LDB1-203ENST00000461873 CDK18Q07002 472 aa8.81□□□□□ -1
LDB1-203ENST00000461873 VAC14Q08AM6 782 aa8.81□□□□□ -1
LDB1-203ENST00000461873 GALNT3Q14435 633 aa8.81□□□□□ -1
LDB1-203ENST00000461873 MANEAQ5SRI9 462 aa8.81□□□□□ -1
LDB1-203ENST00000461873 ZDHHC20Q5W0Z9 365 aa8.81□□□□□ -1
LDB1-203ENST00000461873 ALS2CLQ60I27 953 aa8.81□□□□□ -1
LDB1-203ENST00000461873 USP53Q70EK8 1073 aa8.81□□□□□ -1
LDB1-203ENST00000461873 TECPR1Q7Z6L1 1165 aa8.81□□□□□ -1
LDB1-203ENST00000461873 DAAM2Q86T65 1068 aa8.81□□□□□ -1
LDB1-203ENST00000461873 CCDC170Q8IYT3 715 aa8.81□□□□□ -1
LDB1-203ENST00000461873 RCOR2Q8IZ40 523 aa8.81□□□□□ -1
LDB1-203ENST00000461873 PQLC3Q8N755 202 aa8.81□□□□□ -1
LDB1-203ENST00000461873 LSM14AQ8ND56 463 aaKnown RBP8.81□□□□□ -1
LDB1-203ENST00000461873 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
LDB1-203ENST00000461873 CCNL2Q96S94 520 aaPredicted RBP8.81□□□□□ -1
LDB1-203ENST00000461873 ZSCAN5AQ9BUG6 496 aa8.81□□□□□ -1
LDB1-203ENST00000461873 FSD1LQ9BXM9 530 aa8.81□□□□□ -1
LDB1-203ENST00000461873 SLC25A51Q9H1U9 297 aa8.81□□□□□ -1
LDB1-203ENST00000461873 OSGEPL1Q9H4B0 414 aa8.81□□□□□ -1
LDB1-203ENST00000461873 PRORYQ9H606 182 aa8.81□□□□□ -1
LDB1-203ENST00000461873 SPATS2LQ9NUQ6 558 aaKnown RBP8.81□□□□□ -1
LDB1-203ENST00000461873 VPS18Q9P253 973 aa8.81□□□□□ -1
LDB1-203ENST00000461873 PCDHGA7Q9Y5G6 932 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms