RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 CCDC70Q6NSX1 233 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 TATDN1Q6P1N9 297 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 MON1AQ86VX9 555 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 ERC1Q8IUD2 1116 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 NAXEQ8NCW5 288 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 C7orf57Q8NEG2 295 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 ST8SIA4Q92187 359 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 TRIB2Q92519 343 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 USP6NLQ92738 828 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 ATOH1Q92858 354 aaPredicted RBP4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 RNF183Q96D59 192 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 C12orf42Q96LP6 360 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 PPM1MQ96MI6 270 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 GFM1Q96RP9 751 aaKnown RBP4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 MEIS3Q99687 375 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 PLAC1Q9HBJ0 212 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 WDR6Q9NNW5 1121 aaKnown RBP4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 HIF1ANQ9NWT6 349 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 MTMR10Q9NXD2 777 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 IL36RNQ9UBH0 155 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 NRBP1Q9UHY1 535 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 RAI2Q9Y5P3 530 aa4.6□□□□□ -1.67
PRPF4B-202ENST00000461612 MS4A18H0YCH9 400 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 EBAG9O00559 213 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SURF6O75683 361 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 IDH1O75874 414 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SLC25A27O95847 323 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 GH2P01242 217 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 HSP90AA1P07900 732 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 ZNF8P17098 575 aaPredicted RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CTPS1P17812 591 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CD72P21854 359 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 GNLYP22749 145 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 PPP3CCP48454 512 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 POLGP54098 1239 aaPredicted RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 ROR2Q01974 943 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CYP4A11Q02928 519 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 TBX2Q13207 712 aaPredicted RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 PSME4Q14997 1843 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 LRRC26Q2I0M4 334 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 ZNF260Q3ZCT1 412 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SLC22A25Q6T423 547 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 PATL1Q86TB9 770 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CHD1LQ86WJ1 897 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 GDPD5Q8WTR4 605 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 FRAT1Q92837 279 aaPredicted RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 ZBTB10Q96DT7 871 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 RNF125Q96EQ8 232 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 URB1-AS1Q96HZ7 61 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CRNKL1Q9BZJ0 848 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 RBM38Q9H0Z9 239 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SLC32A1Q9H598 525 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 UBN1Q9NPG3 1134 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SPATS2LQ9NUQ6 558 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 PLK2Q9NYY3 685 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 NCKIPSDQ9NZQ3 722 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CACNA1IQ9P0X4 2223 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SWAP70Q9UH65 585 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 SRPRBQ9Y5M8 271 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 CYP46A1Q9Y6A2 500 aa4.59□□□□□ -1.67
PRPF4B-202ENST00000461612 RFX7Q2KHR2 1363 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 FLT1P17948 1338 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 PABPN1LA6NDY0 278 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 A6NLC8 198 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 CCER2I3L3R5 266 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 MPHOSPH10O00566 681 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 SPRY3O43610 288 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 CLDN7O95471 211 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 AGR2O95994 175 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 URODP06132 367 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 COX7A2P14406 83 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 CCND3P30281 292 aaPredicted RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 CDC25AP30304 524 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 HOXD3P31249 432 aaPredicted RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 TTKP33981 857 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 LIFRP42702 1097 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 PAFAH1B1P43034 410 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 TUBP50607 506 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 EFNB1P98172 346 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 GALNT2Q10471 571 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 GPR18Q14330 331 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 GRB14Q14449 540 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 KCTD2Q14681 263 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 PRICKLE4Q2TBC4 344 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 DNTTIP2Q5QJE6 756 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 ZSCAN25Q6NSZ9 544 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 RRM2BQ7LG56 351 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 TADA2BQ86TJ2 420 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 PALB2Q86YC2 1186 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 CADM3Q8N126 398 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 TEX19Q8NA77 164 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 TMEM18Q96B42 140 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 OTULINQ96BN8 352 aa4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 SEC62Q99442 399 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 SF3B5Q9BWJ5 86 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-202ENST00000461612 POLDIP3Q9BY77 421 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms