RNA–Protein interactions for RNA: ENST00000460746.1

BRD8-215, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-215	ENST00000460746	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	C1orf226	A1L170	272 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	FAM172BP	A6NC97	362 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	LRRC53	A6NM62	1247 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	ZG16	O60844	167 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	KCNK5	O95279	499 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	GNL1	P36915	607 aa	Predicted RBP	4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	RAD23B	P54727	409 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	CLDN20	P56880	219 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	CSNK2A1	P68400	391 aa	Predicted RBP	4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	GTF2H2	Q13888	395 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	GSTA3	Q16772	222 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	KRT24	Q2M2I5	525 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	CDON	Q4KMG0	1287 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	GTF2H2C	Q6P1K8	395 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	KCTD8	Q6ZWB6	473 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	DPPA4	Q7L190	304 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	ATG9A	Q7Z3C6	839 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	KCNH5	Q8NCM2	988 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	CSNK2A3	Q8NEV1	391 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	SLC38A5	Q8WUX1	472 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	APBB2	Q92870	758 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	HES6	Q96HZ4	224 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	NEUROD6	Q96NK8	337 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	ACOX2	Q99424	681 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	SH3GL2	Q99962	352 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	TMEM47	Q9BQJ4	181 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	SYT17	Q9BSW7	474 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	PDP2	Q9P2J9	529 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	CNOT8	Q9UFF9	292 aa	Known RBP	4.9	□□□□□ -1.63
BRD8-215	ENST00000460746	GAB2	Q9UQC2	676 aa		4.9	□□□□□ -1.63
BRD8-215	ENST00000460746		A0A1W2PS18	150 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	NKX2-2	O95096	273 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	DDX5	P17844	614 aa	Known RBP	4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	RRM1	P23921	792 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	IL15	P40933	162 aa	Predicted RBP	4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	ZRSR2	Q15696	482 aa	Known RBP	4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	USP41	Q3LFD5	358 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	PLA2G4F	Q68DD2	849 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	ACAD10	Q6JQN1	1059 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	BRAT1	Q6PJG6	821 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	PIGT	Q969N2	578 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	ZNF501	Q96CX3	271 aa	Predicted RBP	4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	ASAH2	Q9NR71	780 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	DLGAP4	Q9Y2H0	992 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	KLHL20	Q9Y2M5	609 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	UTY	O14607	1347 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	PTPRC	P08575	1304 aa		4.89	□□□□□ -1.63
BRD8-215	ENST00000460746	CTAGE9	A4FU28	777 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	GOLGA6L9	A6NEM1	432 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	HOXB5	P09067	269 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	CTAGE8	P0CG41	777 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	CD53	P19397	219 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	USP8	P40818	1118 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	APOBEC1	P41238	236 aa	Known RBP	4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	TMEM115	Q12893	351 aa	Predicted RBP	4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	FRG1	Q14331	258 aa	Known RBP	4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	C6orf141	Q5SZD1	244 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	SIGIRR	Q6IA17	410 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	OR7E24	Q6IFN5	339 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	CDC73	Q6P1J9	531 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	FAM171B	Q6P995	826 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	TSSK4	Q6SA08	328 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	NFE4	Q86UQ8	179 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	CTAGE4	Q8IX94	777 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	MAGEC3	Q8TD91	643 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	MMAB	Q96EY8	250 aa	Predicted RBP	4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	PCGF1	Q9BSM1	259 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	HAO1	Q9UJM8	370 aa		4.88	□□□□□ -1.63
BRD8-215	ENST00000460746	FAF1	Q9UNN5	650 aa	Predicted RBP	4.88	□□□□□ -1.63
BRD8-215	ENST00000460746		A0A1W2PQF6	199 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	SPINT2	O43291	252 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	UBL4A	P11441	157 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	XBP1	P17861	261 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	PBX3	P40426	434 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	F2RL1	P55085	397 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	PITX1	P78337	314 aa	Predicted RBP	4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	COG7	P83436	770 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	FOXM1	Q08050	763 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	SIRPB2	Q5JXA9	342 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	C18orf63	Q68DL7	685 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	TRNP1	Q6NT89	227 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	OR52I2	Q8NH67	350 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	METTL6	Q8TCB7	284 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	MORC4	Q8TE76	937 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	SAAL1	Q96ER3	474 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	WDFY2	Q96P53	400 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	SMC6	Q96SB8	1091 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	ACSL5	Q9ULC5	683 aa		4.87	□□□□□ -1.63
BRD8-215	ENST00000460746	C5orf60	A6NFR6	353 aa		4.86	□□□□□ -1.63
BRD8-215	ENST00000460746	WDR1	O75083	606 aa		4.86	□□□□□ -1.63
BRD8-215	ENST00000460746	ZNF234	Q14588	700 aa		4.86	□□□□□ -1.63
BRD8-215	ENST00000460746	ACCSL	Q4AC99	568 aa		4.86	□□□□□ -1.63
BRD8-215	ENST00000460746	FRG2	Q64ET8	278 aa		4.86	□□□□□ -1.63
BRD8-215	ENST00000460746	PMS2CL	Q68D20	193 aa		4.86	□□□□□ -1.63
BRD8-215	ENST00000460746	INO80C	Q6PI98	192 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms