RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	KCTD11	Q693B1	232 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	TTC27	Q6P3X3	843 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	C22orf39	Q6P5X5	142 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	PKN3	Q6P5Z2	889 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	LINGO4	Q6UY18	593 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	C4orf22	Q6V702	233 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	DPY19L3	Q6ZPD9	716 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	PRPF39	Q86UA1	669 aa	Known RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	RASSF3	Q86WH2	238 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	CBARP	Q8N350	705 aa	Predicted RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	ATPAF2	Q8N5M1	289 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	CAMKK1	Q8N5S9	505 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	ALLC	Q8N6M5	410 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	NETO2	Q8NC67	525 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SLC16A11	Q8NCK7	471 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	TMEM52	Q8NDY8	209 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SPATA4	Q8NEY3	305 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	OR2AP1	Q8NGE2	309 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	ATG4A	Q8WYN0	398 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SEC14L1	Q92503	715 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	HAUS1	Q96CS2	278 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	IMP4	Q96G21	291 aa	Known RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	RPL10L	Q96L21	214 aa	Known RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	RHOV	Q96L33	236 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	ZNF641	Q96N77	438 aa	Predicted RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SPATA13	Q96N96	652 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	FCRL5	Q96RD9	977 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	NUDCD1	Q96RS6	583 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	TUBGCP5	Q96RT8	1024 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	GORASP1	Q9BQQ3	440 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SPATA25	Q9BR10	227 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	CIPC	Q9C0C6	399 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SLC25A51	Q9H1U9	297 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	ARNT2	Q9HBZ2	717 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	PRMT8	Q9NR22	394 aa	Predicted RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	VPS45	Q9NRW7	570 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	RBM12	Q9NTZ6	932 aa	Known RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	RBM22	Q9NW64	420 aa	Known RBP eCLIP	5.69	□□□□□ -1.5	4e-10	■■■■□ 21.9
PTPN12-209	ENST00000460731	C2orf42	Q9NWW7	574 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	DKK3	Q9UBP4	350 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	SLC25A13	Q9UJS0	675 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	ACTL7A	Q9Y615	435 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	NUMA1	Q14980	2115 aa		5.69	□□□□□ -1.5
PTPN12-209	ENST00000460731	WDFY4	Q6ZS81	3184 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	CACNA1E	Q15878	2313 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	LOC285095	A0A1B0GVY8	99 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731		A0A1W2PQ67	120 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	KCNK1	O00180	336 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	RNF103	O00237	685 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	KRIT1	O00522	736 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	TP73	O15350	636 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	NOBOX	O60393	691 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	PHF2	O75151	1096 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ZNF205	O95201	554 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	KLF8	O95600	359 aa	Predicted RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	JCHAIN	P01591	159 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	CTSL	P07711	333 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ENDOU	P21128	410 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	PSMA3	P25788	255 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	AVPR2	P30518	371 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ADRA1A	P35348	466 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	PAFAH1B1	P43034	410 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	MMP13	P45452	471 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	RGR	P47804	291 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	DNA2	P51530	1060 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	SUOX	P51687	545 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	DRG2	P55039	364 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	RPL26	P61254	145 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ST8SIA6	P61647	398 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	SNRPD1	P62314	119 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	NIPAL4	Q0D2K0	466 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	MTAP	Q13126	283 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	UBXN2B	Q14CS0	331 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	PARP6	Q2NL67	630 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	P3H1	Q32P28	736 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ZNF528	Q3MIS6	628 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ANKRD20A2	Q5SQ80	823 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ANKRD20A1	Q5TYW2	823 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ANKRD20A3	Q5VUR7	823 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ARMC3	Q5W041	872 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	KIAA1211L	Q6NV74	962 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	DARS2	Q6PI48	645 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	NCEH1	Q6PIU2	408 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ZC3H14	Q6PJT7	736 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	SERPINA13P	Q6UXR4	307 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	RANBP10	Q6VN20	620 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731		Q6ZS52	159 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	SRL	Q86TD4	932 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ZC3H18	Q86VM9	953 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	CDKL3	Q8IVW4	592 aa	Predicted RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	CHPF	Q8IZ52	775 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ZNF567	Q8N184	647 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	MMGT1	Q8N4V1	131 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	TMEM105	Q8N8V8	129 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	ATP11C	Q8NB49	1132 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	TXNDC5	Q8NBS9	432 aa	Known RBP	5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	CCNY	Q8ND76	341 aa		5.68	□□□□□ -1.5
PTPN12-209	ENST00000460731	NUP43	Q8NFH3	380 aa		5.68	□□□□□ -1.5

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