RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 ATP1A1P05023 1023 aaKnown RBP21.3■■□□□ 1
ABCD4-202ENST00000460308 CEACAM5P06731 702 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 CKMT2P17540 419 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 TCEA2Q15560 299 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 DEFB133Q30KQ1 61 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 ZDHHC20Q5W0Z9 365 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 DRICH1Q6PGQ1 229 aaPredicted RBP21.3■■□□□ 1
ABCD4-202ENST00000460308 GSTA5Q7RTV2 222 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 SLCO6A1Q86UG4 719 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 SDR16C5Q8N3Y7 309 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 GPR26Q8NDV2 337 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 WDR24Q96S15 920 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 NAP1L3Q99457 506 aaPredicted RBP21.3■■□□□ 1
ABCD4-202ENST00000460308 ZSCAN5AQ9BUG6 496 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 CLPBQ9H078 707 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 SUDS3Q9H7L9 328 aaPredicted RBP21.3■■□□□ 1
ABCD4-202ENST00000460308 LRRC40Q9H9A6 602 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 CARS2Q9HA77 564 aaKnown RBP21.3■■□□□ 1
ABCD4-202ENST00000460308 FEZ2Q9UHY8 353 aaPredicted RBP21.3■■□□□ 1
ABCD4-202ENST00000460308 PKP3Q9Y446 797 aa21.3■■□□□ 1
ABCD4-202ENST00000460308 USP27XA6NNY8 438 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 USP12O75317 370 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 GIMD1P0DJR0 217 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 BPIP17213 487 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 FDFT1P37268 417 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 LMAN1P49257 510 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 DCDC1P59894 354 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 DNAJC3Q13217 504 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 OLIG2Q13516 323 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 PROX2Q3B8N5 592 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 ZCCHC8Q6NZY4 707 aaKnown RBP21.29■■□□□ 1
ABCD4-202ENST00000460308 NYAP1Q6ZVC0 841 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 PDCD7Q8N8D1 485 aaKnown RBP21.29■■□□□ 1
ABCD4-202ENST00000460308 PNPLA1Q8N8W4 532 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 GLMNQ92990 594 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 FRMD8Q9BZ67 464 aaPredicted RBP21.29■■□□□ 1
ABCD4-202ENST00000460308 PAK5Q9P286 719 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 TMEM98Q9Y2Y6 226 aa21.29■■□□□ 1
ABCD4-202ENST00000460308 C2orf81A6NN90 581 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 E7EVH7 732 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 YY2O15391 372 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 STX7O15400 261 aaKnown RBP21.28■■□□□ 1
ABCD4-202ENST00000460308 GNPDA1P46926 289 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 POLD2P49005 469 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 DUSP3P51452 185 aaPredicted RBP21.28■■□□□ 1
ABCD4-202ENST00000460308 KCTD11Q693B1 232 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 LVRNQ6Q4G3 990 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 TAF8Q7Z7C8 310 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 TRIM74Q86UV6 250 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 KLHDC8BQ8IXV7 354 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 RASGEF1CQ8N431 466 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 TTC30BQ8N4P2 665 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 TRAM1L1Q8N609 369 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 FAM181AQ8N9Y4 354 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 COX14Q96I36 57 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 MS4A14Q96JA4 679 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 APOLD1Q96LR9 279 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 PLEKHG4BQ96PX9 1271 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 OSBPL9Q96SU4 736 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 TMEM168Q9H0V1 697 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.28■■□□□ 1
ABCD4-202ENST00000460308 NCKIPSDQ9NZQ3 722 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 NFKBIL1Q9UBC1 381 aaPredicted RBP21.28■■□□□ 1
ABCD4-202ENST00000460308 SUFUQ9UMX1 484 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 SLC17A4Q9Y2C5 497 aa21.28■■□□□ 1
ABCD4-202ENST00000460308 FADS2P1A8MWK0 482 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 PPFIA2O75334 1257 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 CRTAMO95727 393 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 IVLP07476 585 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 ETS1P14921 441 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 LPOP22079 712 aaPredicted RBP21.27■■□□□ 1
ABCD4-202ENST00000460308 GNG11P61952 73 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 PDE1BQ01064 536 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 TAF1AQ15573 450 aaPredicted RBP21.27■■□□□ 1
ABCD4-202ENST00000460308 KCTD16Q68DU8 428 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 PDPK2PQ6A1A2 396 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 LINC00523Q86TU6 105 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 BRSK1Q8TDC3 778 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 ETNK1Q9HBU6 452 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 ARNT2Q9HBZ2 717 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 TOR4AQ9NXH8 423 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 IL17CQ9P0M4 197 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 GPSM3Q9Y4H4 160 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 PCDHGA1Q9Y5H4 931 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 LRP4O75096 1905 aa21.27■■□□□ 1
ABCD4-202ENST00000460308 ERI2A8K979 691 aaKnown RBP21.26■□□□□ 0.99
ABCD4-202ENST00000460308 BUD23O43709 281 aaKnown RBP21.26■□□□□ 0.99
ABCD4-202ENST00000460308 RFPL3O75679 317 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 SLC25A14O95258 325 aaPredicted RBP21.26■□□□□ 0.99
ABCD4-202ENST00000460308 AP2A1O95782 977 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 CELA2BP08218 269 aaPredicted RBP21.26■□□□□ 0.99
ABCD4-202ENST00000460308 CDK4P11802 303 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 CKMT1AP12532 417 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 PMLP29590 882 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 SPAM1P38567 509 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 KCNJ1P48048 391 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 RPIAP49247 311 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 C6orf132Q5T0Z8 1188 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 C4orf22Q6V702 233 aa21.26■□□□□ 0.99
ABCD4-202ENST00000460308 MARK2Q7KZI7 788 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms