RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 AOC1P19801 751 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 FASTKQ14296 549 aaKnown RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 DEFB115Q30KQ5 88 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 OGFOD2Q6N063 350 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 PIWIL4Q7Z3Z4 852 aaKnown RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 TMEM173Q86WV6 379 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 FBXO22Q8NEZ5 403 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 HBEGFQ99075 208 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 ABCG8Q9H221 673 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 SEMA6AQ9H2E6 1030 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 OLA1Q9NTK5 396 aaKnown RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CATSPERZQ9NTU4 200 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CD274Q9NZQ7 290 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 SRRDQ9UH36 339 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 TNFRSF10BO14763 440 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 IPO13O94829 963 aaKnown RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CKMP06732 381 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 MYL4P12829 197 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ITGAXP20702 1163 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 HMOX2P30519 316 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 KPNA1P52294 538 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 RPL26P61254 145 aaKnown RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 NOGQ13253 232 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CDH18Q13634 790 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 MBTPS1Q14703 1052 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 TRIP4Q15650 581 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 RNF219Q5W0B1 726 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 KRT80Q6KB66 452 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 FRA10AC1Q70Z53 315 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 PCDHB9Q9Y5E1 797 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 K7EPI3 171 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 NR5A2O00482 541 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ENPP3O14638 875 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CASQ2O14958 399 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 KDM1AO60341 852 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 PSMC3P17980 439 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 KCNA5P22460 613 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CDK9P50750 372 aaKnown RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ESRRGP62508 458 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 PTPRRQ15256 657 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 PPP1R3AQ16821 1122 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 FUT11Q495W5 492 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 PITRM1Q5JRX3 1037 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 HECTD3Q5T447 861 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 STXBP5Q5T5C0 1151 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 KIAA0930Q6ICG6 404 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 DENND5AQ6IQ26 1287 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 SPPL2BQ8TCT7 592 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ANKRD49Q8WVL7 239 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 FUBP3Q96I24 572 aaKnown RBP eCLIP15.37■□□□□ 0.053e-8■■■□□ 16.8
LMNB1-203ENST00000460265 CRISPLD1Q9H336 500 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 TMEM161AQ9NX61 479 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 BCAP29Q9UHQ4 241 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 TIMM22Q9Y584 194 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 SLC30A1Q9Y6M5 507 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 LOC285556D6RIA3 1793 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 A0A087X1B8 175 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 LRRC14BA6NHZ5 514 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 UBXN8O00124 270 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 BTN3A1O00481 513 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 GUCA1CO95843 209 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CORO1AP31146 461 aaKnown RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 RALGDSQ12967 914 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 DSC3Q14574 896 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 METTL21CQ5VZV1 264 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ALDH16A1Q8IZ83 802 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 CENPSQ8N2Z9 138 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 BHLHE22Q8NFJ8 381 aaPredicted RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 OR9I1Q8NGQ6 314 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 OR4L1Q8NH43 312 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 APOL5Q9BWW9 433 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ZNF696Q9H7X3 374 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 FBRSL1Q9HCM7 1045 aaKnown RBP15.37■□□□□ 0.05
LMNB1-203ENST00000460265 VPS45Q9NRW7 570 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 SEPT3Q9UH03 358 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 RAB26Q9ULW5 256 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 ANGPTL3Q9Y5C1 460 aa15.37■□□□□ 0.05
LMNB1-203ENST00000460265 DYTNA2CJ06 578 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 H7C4K7 107 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 PFDN6O15212 129 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 ADAM12O43184 909 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 CLCN5P51795 746 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 GNA12Q03113 381 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SGO1Q5FBB7 561 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 STYXQ8WUJ0 223 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 EGFL8Q99944 293 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 RNF208Q9H0X6 261 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 TRAF6Q9Y4K3 522 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 CEP290O15078 2479 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 OR6C75A6NL08 312 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 NDST2P52849 883 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 ARPC4P59998 168 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 RHOAP61586 193 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
LMNB1-203ENST00000460265 BORAQ6PGQ7 559 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 FBXW8Q8N3Y1 598 aa15.36■□□□□ 0.05
LMNB1-203ENST00000460265 C1orf21Q9H246 121 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms