RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 UCMAQ8WVF2 138 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 GATA6Q92908 595 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 TMEM169Q96HH4 297 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 ZNF558Q96NG5 402 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 SLC22A12Q96S37 553 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 KLHL4Q9C0H6 718 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 IKZF3Q9UKT9 509 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 FAM50BQ9Y247 325 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 OR51B4Q9Y5P0 310 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 DNAJC15Q9Y5T4 150 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 H0Y626 953 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PEX1O43933 1283 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 FZD6O60353 706 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 GREM1O60565 184 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 OLFM2O95897 454 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 GFAPP14136 432 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PKMP14618 531 aaKnown RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 MC4RP32245 332 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 ADARP55265 1226 aaKnown RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PKNOX1P55347 436 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 LRP8Q14114 963 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PTPRNQ16849 979 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 KANK2Q63ZY3 851 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PSAPL1Q6NUJ1 521 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 SLC39A5Q6ZMH5 540 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PIANPQ8IYJ0 282 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 AUTS2Q8WXX7 1259 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 DLG3Q92796 817 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 USP13Q92995 863 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 ZNF689Q96CS4 500 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 TOX2Q96NM4 488 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 CYP2S1Q96SQ9 504 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 C1QTNF3Q9BXJ4 246 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 ZNF334Q9HCZ1 680 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 CACNA2D2Q9NY47 1150 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 C6orf203Q9P0P8 240 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 DNMT3BQ9UBC3 853 aaKnown RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 SYCE1LA8MT33 242 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 AZIN1O14977 448 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 STX7O15400 261 aaKnown RBP16.59■□□□□ 0.25
CCDC43-202ENST00000457422 KLK8O60259 260 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 VPS26AO75436 327 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 BCAS2O75934 225 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-202ENST00000457422 MT-CO1P00395 513 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 AGKQ53H12 422 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 AARS2Q5JTZ9 985 aaKnown RBP16.59■□□□□ 0.25
CCDC43-202ENST00000457422 REP15Q6BDI9 236 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 FAM117BQ6P1L5 589 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 Q6ZNB5 142 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 TMEM126BQ8IUX1 230 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 FAM217AQ8IXS0 508 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 TCEAL8Q8IYN2 117 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 FBXO39Q8N4B4 442 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 GDPD5Q8WTR4 605 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 PPP2R3CQ969Q6 453 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
CCDC43-202ENST00000457422 C3orf30Q96M34 536 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 GPR21Q99679 349 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 FEM1AQ9BSK4 669 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 SLC25A23Q9BV35 468 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 BPIFA1Q9NP55 256 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 MID1IP1Q9NPA3 183 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 MRPL40Q9NQ50 206 aaKnown RBP16.59■□□□□ 0.25
CCDC43-202ENST00000457422 RNF112Q9ULX5 631 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 PCDHGA7Q9Y5G6 932 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 COMMD10Q9Y6G5 202 aa16.59■□□□□ 0.25
CCDC43-202ENST00000457422 SUPT3HB4E1H0 165 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 STX16-NPEPL1H3BU86 382 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 TRIM38O00635 465 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 FBP2O00757 339 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 STX16O14662 325 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 CLASP2O75122 1294 aaKnown RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 SUPT3HO75486 399 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 SNRPB2P08579 225 aaKnown RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 RPS17P08708 135 aaKnown RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 PSME3P61289 254 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 MS4A2Q01362 244 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 HACD2Q6Y1H2 254 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 APLFQ8IW19 511 aaPredicted RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 PQLC1Q8N2U9 271 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 ADAMTS19Q8TE59 1207 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 TOP1MTQ969P6 601 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 NSUN5Q96P11 429 aaKnown RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 RC3H2Q9HBD1 1191 aaKnown RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 CCDC167Q9P0B6 97 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 GALPQ9UBC7 116 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 MAFFQ9ULX9 164 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 FNDC3AQ9Y2H6 1198 aaKnown RBP16.58■□□□□ 0.25
CCDC43-202ENST00000457422 INSL5Q9Y5Q6 135 aa16.58■□□□□ 0.25
CCDC43-202ENST00000457422 A0A0U1RQS6 177 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 TYW5A2RUC4 315 aaKnown RBP16.58■□□□□ 0.24
CCDC43-202ENST00000457422 MAGEA13PA6NCF6 341 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 PPP6CO00743 305 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 ACOT8O14734 319 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 ECI2O75521 394 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 TSPAN12O95859 305 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 URODP06132 367 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 PEX2P28328 305 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms