RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 VTI1BQ9UEU0 232 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 VPS28Q9UK41 221 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 TMCO1Q9UM00 188 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 MICAL3Q7RTP6 2002 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 HEATR9A2RTY3 570 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 NR5A2O00482 541 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 DLGAP1O14490 977 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 TRIM24O15164 1050 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 SUPT7LO94864 414 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 GNRH1P01148 92 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 APOA4P06727 396 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 MMP2P08253 660 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 CCL5P13501 91 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 RHOQP17081 205 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 MAGEA10P43363 369 aaPredicted RBP12.39□□□□□ -0.43
LINC00959-201ENST00000456581 SGSHP51688 502 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 SLC12A2P55011 1212 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 CDKN2DP55273 166 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 FAM83EQ2M2I3 478 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 KRT80Q6KB66 452 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 ANKS3Q6ZW76 656 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 IFNEQ86WN2 208 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 SMIM14Q96QK8 99 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM248Q9NWD8 314 aa12.39□□□□□ -0.43
LINC00959-201ENST00000456581 HTRA2O43464 458 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 GPC4O75487 556 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 PENKP01210 267 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 PRSS56P0CW18 603 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 IRF1P10914 325 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 SLC2A3P11169 496 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 OXTRP30559 389 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 CD151P48509 253 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ARSDP51689 593 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ECT2LQ008S8 904 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 RHDQ02161 417 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 POLD3Q15054 466 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 MARC1Q5VT66 337 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 KDELC1Q6UW63 502 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 LPCAT2Q7L5N7 544 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 CARM1Q86X55 608 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 RDH11Q8TC12 318 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF597Q96LX8 424 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 CLSTN3Q9BQT9 956 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 NACA2Q9H009 215 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 MARCH4Q9P2E8 410 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 DOLKQ9UPQ8 538 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 TCAF1Q9Y4C2 921 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 PSMD3O43242 534 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 B4GAT1O43505 415 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 KLKB1P03952 638 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 GEMP55040 296 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 NR1H2P55055 460 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 GRB7Q14451 532 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 KCTD21Q4G0X4 260 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 TECRLQ5HYJ1 363 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 KIAA1841Q6NSI8 718 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ZBTB49Q6ZSB9 765 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 CBR4Q8N4T8 237 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 PPHLN1Q8NEY8 458 aaKnown RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 BHMTQ93088 406 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 FBXL20Q96IG2 436 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 EXOC2Q96KP1 924 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 LTB4R2Q9NPC1 389 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 SPAG4Q9NPE6 437 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 SMPD4Q9NXE4 827 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 BTRCQ9Y297 605 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 IGLV3-10A0A075B6K4 115 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 C2orf78A6NCI8 922 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 TSPAN3O60637 253 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 RAMP2O60895 175 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 IGLV3-27P01718 113 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 TACR2P21452 398 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ATP5F1P24539 256 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 CCR3P51677 355 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 NRG1Q02297 640 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 KIF19Q2TAC6 998 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 TIGD7Q6NT04 549 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 XKR5Q6UX68 686 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 SETD3Q86TU7 594 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 EPHX4Q8IUS5 362 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 LRRC43Q8N309 656 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF786Q8N393 782 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 FIBCD1Q8N539 461 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 DLG3Q92796 817 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 NSMCE3Q96MG7 304 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 RANBP9Q96S59 729 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 MRPL57Q9BQC6 102 aaKnown RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 RNF38Q9H0F5 515 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 CWH43Q9H720 699 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 SMOXQ9NWM0 555 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms