RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 DNAJC21Q5F1R6 531 aaKnown RBP17.77■□□□□ 0.44
FAM239A-203ENST00000456563 ZDHHC24Q6UX98 284 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 KDM7AQ6ZMT4 941 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 PTAR1Q7Z6K3 402 aaPredicted RBP17.77■□□□□ 0.44
FAM239A-203ENST00000456563 AGGF1Q8N302 714 aaeCLIP17.77■□□□□ 0.446e-8■■■■■ 27
FAM239A-203ENST00000456563 MPP5Q8N3R9 675 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 OR13J1Q8NGT2 312 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 CDKN2AIPNLQ96HQ2 116 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 ZNF778Q96MU6 729 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 SPATA16Q9BXB7 569 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 WDR26Q9H7D7 661 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 FAM114A2Q9NRY5 505 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 TREX1Q9NSU2 369 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 FKBPLQ9UIM3 349 aa17.77■□□□□ 0.44
FAM239A-203ENST00000456563 FAM237BA0A1B0GVD1 139 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 A0A1B0GVT2 93 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 ESYT3A0FGR9 886 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 FADS2P1A8MWK0 482 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 PATE3B3GLJ2 98 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 CFIP05156 583 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 ZNF806P0C7X5 589 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 PLTPP55058 493 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 C21orf59P57076 290 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 NXPH1P58417 271 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 KIAA1024LP59773 190 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 TMPRSS15P98073 1019 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 CDK3Q00526 305 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 DHX9Q08211 1270 aaKnown RBP17.76■□□□□ 0.43
FAM239A-203ENST00000456563 PEX6Q13608 980 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 CHRNA6Q15825 494 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 MSS51Q4VC12 460 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 LAYNQ6UX15 382 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 FAM151BQ6UXP7 276 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 HEATR4Q86WZ0 1026 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 FBXO25Q8TCJ0 367 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 RUBCNQ92622 972 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 FUBP1Q96AE4 644 aaKnown RBP17.76■□□□□ 0.43
FAM239A-203ENST00000456563 LRRC39Q96DD0 335 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 PWWP2AQ96N64 755 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 FAM129AQ9BZQ8 928 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 PHPT1Q9NRX4 125 aaPredicted RBP17.76■□□□□ 0.43
FAM239A-203ENST00000456563 SAMD15Q9P1V8 674 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 SLC2A6Q9UGQ3 507 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 CNOT6Q9ULM6 557 aaKnown RBP17.76■□□□□ 0.43
FAM239A-203ENST00000456563 ANKRD6Q9Y2G4 727 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 OR1A2Q9Y585 309 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 SCN8AQ9UQD0 1980 aa17.76■□□□□ 0.43
FAM239A-203ENST00000456563 CCDC78A2IDD5 438 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 E7ESA3 106 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 CACNB4O00305 520 aaPredicted RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 KHNYNO15037 678 aaKnown RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 SRP72O76094 671 aaKnown RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 SLU7O95391 586 aaKnown RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 NMBRP28336 390 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 ARSDP51689 593 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 TUBB4BP68371 445 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 IRX4P78413 519 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 BNC1Q01954 994 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 ITGA9Q13797 1035 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 PTK2BQ14289 1009 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 NFATC4Q14934 902 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 CCDC6Q16204 474 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 BBS9Q3SYG4 887 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 ATP13A5Q4VNC0 1218 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 CASC4Q6P4E1 433 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 TMEM135Q86UB9 458 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 SPATS2Q86XZ4 545 aaKnown RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 SLC22A18ASQ8N1D0 253 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 ZNF398Q8TD17 642 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 BTN2A2Q8WVV5 523 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 STAMBPL1Q96FJ0 436 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 SGSM3Q96HU1 749 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 COX14Q96I36 57 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 TBATAQ96M53 351 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 VPS35Q96QK1 796 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 NAT9Q9BTE0 207 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 NUSAP1Q9BXS6 441 aaKnown RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 FOXP3Q9BZS1 431 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 ZDHHC5Q9C0B5 715 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 PHACTR1Q9C0D0 580 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 GDF3Q9NR23 364 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 ZDHHC18Q9NUE0 388 aa17.75■□□□□ 0.43
FAM239A-203ENST00000456563 FNDC3AQ9Y2H6 1198 aaKnown RBP17.75■□□□□ 0.43
FAM239A-203ENST00000456563 MYLKQ15746 1914 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 GPR179Q6PRD1 2367 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 SPTY2D1-AS1A0A0U1RR47 76 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 AGAP14A8MT82 685 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 CCL22O00626 93 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.43
FAM239A-203ENST00000456563 PRAMEF1O95521 474 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 RHOXF2BP0C7M4 288 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 MYCLP1P12525 358 aaPredicted RBP17.74■□□□□ 0.43
FAM239A-203ENST00000456563 KELP23276 732 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 HTR1BP28222 390 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 MC4RP32245 332 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 CTSKP43235 329 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 THOP1P52888 689 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 SPEM2Q0P670 501 aa17.74■□□□□ 0.43
FAM239A-203ENST00000456563 PDE1CQ14123 709 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms