RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SATB2Q9UPW6 733 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 EPN1Q9Y6I3 576 aaPredicted RBP17.77■□□□□ 0.44
MSH6-207ENST00000456246 A0A0U1RQS6 177 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 CCKBRP32239 447 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 ADCY8P40145 1251 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 PDX1P52945 283 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 DCDC1P59894 354 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 CDK18Q07002 472 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 CLPPQ16740 277 aaPredicted RBP17.76■□□□□ 0.43
MSH6-207ENST00000456246 HENMT1Q5T8I9 393 aaKnown RBP17.76■□□□□ 0.43
MSH6-207ENST00000456246 DOK6Q6PKX4 331 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 RFLNAQ6ZTI6 216 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 NRROSQ86YC3 692 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 GALNT13Q8IUC8 556 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 CCDC50Q8IVM0 306 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 ARL14Q8N4G2 192 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 CCDC97Q96F63 343 aaPredicted RBP17.76■□□□□ 0.43
MSH6-207ENST00000456246 TEKT5Q96M29 485 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 CEP41Q9BYV8 373 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 SUDS3Q9H7L9 328 aaPredicted RBP17.76■□□□□ 0.43
MSH6-207ENST00000456246 RMI1Q9H9A7 625 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 ZFYVE1Q9HBF4 777 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 GLOD4Q9HC38 313 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 ASCL3Q9NQ33 180 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 LRIT1Q9P2V4 623 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 NFKBIL1Q9UBC1 381 aaPredicted RBP17.76■□□□□ 0.43
MSH6-207ENST00000456246 RABGEF1Q9UJ41 708 aa17.76■□□□□ 0.43
MSH6-207ENST00000456246 hCG_1818297A0A087WSY0 165 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 A0A1W2PQM1 296 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 BTNL10A8MVZ5 291 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 HACD1B0YJ81 288 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 NDST3O95803 873 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 FUCA1P04066 466 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 PTPN3P26045 913 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 TNNT3P45378 269 aaPredicted RBP17.75■□□□□ 0.43
MSH6-207ENST00000456246 INHBCP55103 352 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 COPS2P61201 443 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 CCL7P80098 99 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 CTBSQ01459 385 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 BIRC2Q13490 618 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 GALNT3Q14435 633 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 PYCR3Q53H96 274 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 KAZNQ674X7 775 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 PDPK2PQ6A1A2 396 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 ZNF438Q7Z4V0 828 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 SPRED1Q7Z699 444 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 TMEM159Q96B96 161 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 SLC46A1Q96NT5 459 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 FERMT1Q9BQL6 677 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 RBSNQ9H1K0 784 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 SPATS2LQ9NUQ6 558 aaKnown RBP17.75■□□□□ 0.43
MSH6-207ENST00000456246 RNF215Q9Y6U7 377 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 UNC13CQ8NB66 2214 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 PTPRQQ9UMZ3 2332 aa17.75■□□□□ 0.43
MSH6-207ENST00000456246 INPP4BO15327 924 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 ASMTLO95671 621 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 FGF1P05230 155 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 ITGA2BP08514 1039 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 PECAM1P16284 738 aaPredicted RBP17.74■□□□□ 0.43
MSH6-207ENST00000456246 ACTR1BP42025 376 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 GPR3P46089 330 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 POLD2P49005 469 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 ACTR1AP61163 376 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 NR1D2Q14995 579 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 SLC30A9Q6PML9 568 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 LYSMD3Q7Z3D4 306 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 TXLNBQ8N3L3 684 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 AGAP2Q99490 1192 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 ZSCAN5AQ9BUG6 496 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 GOLPH3Q9H4A6 298 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 FAM153AQ9UHL3 310 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 EFR3BQ9Y2G0 817 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 TMEM98Q9Y2Y6 226 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 ZNF711Q9Y462 761 aa17.74■□□□□ 0.43
MSH6-207ENST00000456246 SOWAHDA6NJG2 315 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 RHPN2P1A8MT19 583 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 GPR89AB7ZAQ6 455 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 APOC4-APOC2K7ER74 178 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 PLD2O14939 933 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 ZNF189O75820 626 aaPredicted RBP17.73■□□□□ 0.43
MSH6-207ENST00000456246 APOC2P02655 101 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 GPR89BP0CG08 455 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 AK4P27144 223 aaPredicted RBP17.73■□□□□ 0.43
MSH6-207ENST00000456246 CTNNA1P35221 906 aaKnown RBP17.73■□□□□ 0.43
MSH6-207ENST00000456246 CETN2P41208 172 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 UCNP55089 124 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 XRCC4Q13426 336 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 PCSK7Q16549 785 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 ZNF569Q5MCW4 686 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 BROXQ5VW32 411 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 BBS12Q6ZW61 710 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 CLEC14AQ86T13 490 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 TRIM74Q86UV6 250 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 Q8N9G6 341 aaPredicted RBP17.73■□□□□ 0.43
MSH6-207ENST00000456246 QKIQ96PU8 341 aaKnown RBP eCLIP17.73■□□□□ 0.43
MSH6-207ENST00000456246 WDR24Q96S15 920 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 DPH1Q9BZG8 443 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 GPR63Q9BZJ6 419 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 TRABDQ9H4I3 376 aa17.73■□□□□ 0.43
MSH6-207ENST00000456246 EPB41L5Q9HCM4 733 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms