RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 FBXO39Q8N4B4 442 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 TRPC4APQ8TEL6 797 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 WDR60Q8WVS4 1066 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 ACDQ96AP0 544 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 CNDP1Q96KN2 507 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 RAD9AQ99638 391 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 SEMA4BQ9NPR2 832 aaPredicted RBP13.61□□□□□ -0.23
CLK3-203ENST00000454830 CD274Q9NZQ7 290 aa13.61□□□□□ -0.23
CLK3-203ENST00000454830 TRPC5OSA6NMA1 111 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 SLCO1B7G3V0H7 640 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 PRAMEF1O95521 474 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 ENO3P13929 434 aaPredicted RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 ARSAP15289 507 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 EPCAMP16422 314 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 SERPINA4P29622 427 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 ICE2Q659A1 982 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 ZNF783Q6ZMS7 281 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 CPNE9Q8IYJ1 553 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 SKA2Q8WVK7 121 aaPredicted RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 PEX13Q92968 403 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 UBXN10Q96LJ8 280 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 CIPCQ9C0C6 399 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 CLPBQ9H078 707 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 LINC00597Q9H2U6 94 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 INTS10Q9NVR2 710 aaKnown RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 VPS9D1Q9Y2B5 631 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 ZNF510Q9Y2H8 683 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 CDC7O00311 574 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 GRID2O43424 1007 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 KRT36O76013 467 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 LATS1O95835 1130 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 UGT2B4P06133 528 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 CD1DP15813 335 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 GM2AP17900 193 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 NME5P56597 212 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 OR4D1Q15615 310 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 AARS2Q5JTZ9 985 aaKnown RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 Q6ZNB5 142 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 FRA10AC1Q70Z53 315 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 GRASPQ7Z6J2 395 aaPredicted RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 TMC8Q8IU68 726 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 LPGAT1Q92604 370 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 LINGO1Q96FE5 620 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 FAM8A1Q9UBU6 413 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 SLC25A13Q9UJS0 675 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 WNT6Q9Y6F9 365 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 H3BMM5 538 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 NPHS1O60500 1241 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 LILRB3O75022 631 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 PGLSO95336 258 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 RHOP08100 348 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 PTPN2P17706 415 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 AOC1P19801 751 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 IRS1P35568 1242 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 BMPR1AP36894 532 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 ACVR1Q04771 509 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 HTR3DQ70Z44 454 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 SUGP1Q8IWZ8 645 aaKnown RBP13.6□□□□□ -0.23
CLK3-203ENST00000454830 ULK2Q8IYT8 1036 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 OR6Y1Q8NGX8 325 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 ERLEC1Q96DZ1 483 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 TTC1Q99614 292 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 RNPEPL1Q9HAU8 725 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 SLCO3A1Q9UIG8 710 aa13.6□□□□□ -0.23
CLK3-203ENST00000454830 MYOGP15173 224 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 HOXB8P17481 243 aaPredicted RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 PIK3R1P27986 724 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ATXN3P54252 364 aaPredicted RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 SNRPD1P62314 119 aaKnown RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 SLC7A9P82251 487 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ART3Q13508 389 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 WASHC2DQ5SRD0 308 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 FRMD7Q6ZUT3 714 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 DCBLD1Q8N8Z6 715 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 STAG3L4Q8TBR4 150 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ARMC5Q96C12 935 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ARHGAP26Q9UNA1 814 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 PEX11AO75192 247 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ITGALP20701 1170 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 IL2P60568 153 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 KDM1BQ8NB78 822 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 GPR150Q8NGU9 434 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 APOL5Q9BWW9 433 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 TDP1Q9NUW8 608 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 TRAF6Q9Y4K3 522 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 TRIM24O15164 1050 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 DNAJB1P25685 340 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 EEF1DP29692 281 aaKnown RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 HLA-FP30511 346 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms