RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 IGSF8Q969P0 613 aa11.15□□□□□ -0.62
DDR1-240ENST00000454612 ZBTB18Q99592 522 aa11.15□□□□□ -0.62
DDR1-240ENST00000454612 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
DDR1-240ENST00000454612 FETUBQ9UGM5 382 aa11.15□□□□□ -0.62
DDR1-240ENST00000454612 EVLQ9UI08 416 aaPredicted RBP11.15□□□□□ -0.62
DDR1-240ENST00000454612 FKBPLQ9UIM3 349 aa11.15□□□□□ -0.62
DDR1-240ENST00000454612 DERAQ9Y315 318 aa11.15□□□□□ -0.62
DDR1-240ENST00000454612 FCF1Q9Y324 198 aaKnown RBP11.15□□□□□ -0.62
DDR1-240ENST00000454612 ARIH1Q9Y4X5 557 aaPredicted RBP11.15□□□□□ -0.62
DDR1-240ENST00000454612 MAGEB3O15480 346 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 COQ9O75208 318 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 ZNF682O95780 498 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PSMA4P25789 261 aaKnown RBP11.15□□□□□ -0.63
DDR1-240ENST00000454612 GABRB3P28472 473 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 DIO3P55073 304 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 GRB14Q14449 540 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PKDCCQ504Y2 493 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 OR4L1Q8NH43 312 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 JADE3Q92613 823 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 KCNN1Q92952 543 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 KCTD14Q9BQ13 255 aaPredicted RBP11.15□□□□□ -0.63
DDR1-240ENST00000454612 DGCR6LQ9BY27 220 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PRDM16Q9HAZ2 1276 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PLAC1Q9HBJ0 212 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PNPLA8Q9NP80 782 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 VPS45Q9NRW7 570 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 TRNAU1APQ9NX07 287 aaKnown RBP11.15□□□□□ -0.63
DDR1-240ENST00000454612 GDAP2Q9NXN4 497 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PRELID1Q9Y255 219 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PTCH2Q9Y6C5 1203 aa11.15□□□□□ -0.63
DDR1-240ENST00000454612 PARP14Q460N5 1801 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 C1orf232A0A0U1RR37 186 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 OR1I1O60431 355 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CPSF4O95639 269 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 ALPIP09923 528 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 MC4RP32245 332 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 DPYSQ14117 519 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 RABL3Q5HYI8 236 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 THOC7Q6I9Y2 204 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 SETD3Q86TU7 594 aaPredicted RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 MON1AQ86VX9 555 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 ZNF276Q8N554 614 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CAPSLQ8WWF8 208 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 FAM162AQ96A26 154 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 LINGO1Q96FE5 620 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 RTKNQ9BST9 563 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 NFKBIZQ9BYH8 718 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 VPS4AQ9UN37 437 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 PSMD13Q9UNM6 376 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 ZFP37Q9Y6Q3 630 aaPredicted RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 G3V2L1 256 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CLOCKO15516 846 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 OR4F21O95013 312 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 TRPC1P48995 793 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 NIPAL4Q0D2K0 466 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 PAFAH1B3Q15102 231 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 TSTD2Q5T7W7 516 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 POTEHQ6S545 545 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 EPGNQ6UW88 154 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 GPSM1Q86YR5 675 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 PNPT1Q8TCS8 783 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 DGCR14Q96DF8 476 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 LIMD1Q9UGP4 676 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 LCTP09848 1927 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 PTPRFP10586 1907 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 COL1A2P08123 1366 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 AP3B1O00203 1094 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 AZIN1O14977 448 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CA12O43570 354 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
DDR1-240ENST00000454612 ARPC4P59998 168 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CMPK2Q5EBM0 449 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 SIRPB2Q5JXA9 342 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CLPBQ9H078 707 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 RUBCNLQ9H714 662 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 PARVBQ9HBI1 364 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 EXD2Q9NVH0 621 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 CD84Q9UIB8 345 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 ADAM28Q9UKQ2 775 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 GIT1Q9Y2X7 761 aa11.14□□□□□ -0.63
DDR1-240ENST00000454612 MATN2O00339 956 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 NBNO60934 754 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SEC22BO75396 215 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 MTX2O75431 263 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 DGKQP52824 942 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 C21orf59P57076 290 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 LRRC74AQ0VAA2 488 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 LDLRAP1Q5SW96 308 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 TMEM214Q6NUQ4 689 aaKnown RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 TWIST2Q8WVJ9 160 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 PYCR2Q96C36 320 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 C19orf60Q96EN9 201 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 ACBD6Q9BR61 282 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 FBXO44Q9H4M3 255 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 TUBA8Q9NY65 449 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms