RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 PFDN4Q9NQP4 134 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 CCM2LQ9NUG4 571 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 MARCH5Q9NX47 278 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 PTTG2Q9NZH5 202 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 MAP10Q9P2G4 905 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 NOD1Q9Y239 953 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 LZTS1Q9Y250 596 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 CRYL1Q9Y2S2 319 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 FXYD1O00168 92 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 TLR5O60602 858 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 CLDN11O75508 207 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 STAMBPO95630 424 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 NPPAP01160 153 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 PRLP01236 227 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 F11P03951 625 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 ACLYP53396 1101 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 CLCQ05315 142 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 RAD51Q06609 339 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 FXNQ16595 210 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 ANKS6Q68DC2 871 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 BLOC1S3Q6QNY0 202 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 ERMP1Q7Z2K6 904 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 RNF180Q86T96 592 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 LDB1Q86U70 411 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 PTRH1Q86Y79 214 aaKnown RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 OR52K2Q8NGK3 314 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 BLOC1S5Q8TDH9 187 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 PLD4Q96BZ4 506 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 TMEM175Q9BSA9 504 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 TRIM54Q9BYV2 358 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 TUBB1Q9H4B7 451 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 MID1IP1Q9NPA3 183 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 GPR45Q9Y5Y3 372 aa12.47□□□□□ -0.41
ECHDC1-209ENST00000454591 KIAA1671Q9BY89 1806 aa12.46□□□□□ -0.41
ECHDC1-209ENST00000454591 C7orf72A4D263 438 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 TRIM64CA6NLI5 447 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC38A8A6NNN8 435 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 UBXN8O00124 270 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 CCL22O00626 93 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 NME4O00746 187 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PIP5K1BO14986 540 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PFDN6O15212 129 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 INSIG1O15503 277 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 HNRNPRO43390 633 aaKnown RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 MLYCDO95822 493 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PYGLP06737 847 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PSMC3P17980 439 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 HDCP19113 662 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ETFBP38117 255 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC7A2P52569 658 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 NR1H2P55055 460 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 FAM171A1Q5VUB5 890 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 HMBOX1Q6NT76 420 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF783Q6ZMS7 281 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PRR23BQ6ZRT6 265 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ANKS3Q6ZW76 656 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 CIR1Q86X95 450 aaPredicted RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF354CQ86Y25 554 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 MIB1Q86YT6 1006 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 LGI2Q8N0V4 545 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 FBXO39Q8N4B4 442 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PAPD5Q8NDF8 572 aaKnown RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 LRTOMTQ8WZ04 291 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 EME1Q96AY2 570 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PDLIM5Q96HC4 596 aaKnown RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 CASD1Q96PB1 797 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 TDRD1Q9BXT4 1180 aaKnown RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ANKRD60Q9BZ19 345 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 GPR62Q9BZJ7 368 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PCDHAC1Q9H158 963 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 FBRSL1Q9HCM7 1045 aaKnown RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 AIG1Q9NVV5 245 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ACTR3BQ9P1U1 418 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 HSFX1Q9UBD0 423 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 POLG2Q9UHN1 485 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 DNMT3LQ9UJW3 386 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 CNOT6Q9ULM6 557 aaKnown RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 PRG3Q9Y2Y8 225 aaPredicted RBP12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ST14Q9Y5Y6 855 aa12.46□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF106Q9H2Y7 1883 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 VILLO15195 856 aa12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 SOAT2O75908 522 aa12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 RHOBTB1O94844 696 aa12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 ESRRBO95718 433 aa12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 TSPAN12O95859 305 aa12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 EFEMP2O95967 443 aa12.45□□□□□ -0.42
ECHDC1-209ENST00000454591 UROSP10746 265 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms