RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 KCND1Q9NSA2 647 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 SNX12Q9UMY4 172 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 TMEM202A6NGA9 273 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 CES2O00748 559 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 TNFRSF10CO14798 259 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 AURKAO14965 403 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 PSMD3O43242 534 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 SOD1P00441 154 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 IFNB1P01574 187 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 MYCLP1P12525 358 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-202ENST00000452372 ACTN2P35609 894 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 HMGCLP35914 325 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 GNG11P61952 73 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 CAMK2BQ13554 666 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 ALG11Q2TAA5 492 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 HENMT1Q5T8I9 393 aaKnown RBP19.85■□□□□ 0.77
COL9A3-202ENST00000452372 FAXCQ5TGI0 409 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 ADAMTSL4Q6UY14 1074 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 PHACTR4Q8IZ21 702 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 PRELID2Q8N945 189 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 OR56A4Q8NGH8 313 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 COG1Q8WTW3 980 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 TSACCQ96A04 125 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-202ENST00000452372 TBATAQ96M53 351 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 NAP1L3Q99457 506 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-202ENST00000452372 AGAP2Q99490 1192 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 APOL2Q9BQE5 337 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 CDH19Q9H159 772 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 ARNT2Q9HBZ2 717 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 UCKL1Q9NWZ5 548 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 NFKBIL1Q9UBC1 381 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-202ENST00000452372 KLQ9UEF7 1012 aa19.85■□□□□ 0.77
COL9A3-202ENST00000452372 COL5A1P20908 1838 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-202ENST00000452372 NEMP2A6NFY4 417 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 HK3P52790 923 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 SRP54P61011 504 aaKnown RBP19.84■□□□□ 0.77
COL9A3-202ENST00000452372 CDK3Q00526 305 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 OLIG2Q13516 323 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 HID1Q8IV36 788 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 TTC30BQ8N4P2 665 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 EID2Q8N6I1 236 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 CCDC89Q8N998 374 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 GPR26Q8NDV2 337 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 ZNF548Q8NEK5 533 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-202ENST00000452372 ACTRT1Q8TDG2 376 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 BLOC1S5Q8TDH9 187 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 TBL1YQ9BQ87 522 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 SLC13A1Q9BZW2 595 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 TCEAL2Q9H3H9 227 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-202ENST00000452372 LRRC40Q9H9A6 602 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 SPASTQ9UBP0 616 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 APOBEC3BQ9UH17 382 aaKnown RBP19.84■□□□□ 0.77
COL9A3-202ENST00000452372 CSNK1G3Q9Y6M4 447 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 DGKBQ9Y6T7 804 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 ATRXP46100 2492 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 LRP4O75096 1905 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 ADAMTS20P59510 1910 aa19.84■□□□□ 0.77
COL9A3-202ENST00000452372 ASXL3Q9C0F0 2248 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 PGRMC1O00264 195 aaKnown RBP19.83■□□□□ 0.77
COL9A3-202ENST00000452372 SCAMP1O15126 338 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 AQP9O43315 295 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 RASGRP1O95267 797 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 AP2A1O95782 977 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 GIMD1P0DJR0 217 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 ETS1P14921 441 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 FDFT1P37268 417 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 KCNJ1P48048 391 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 DCDC1P59894 354 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 MSLNQ13421 630 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-202ENST00000452372 SPARCL1Q14515 664 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 SMAD1Q15797 465 aaKnown RBP19.83■□□□□ 0.77
COL9A3-202ENST00000452372 DENND5AQ6IQ26 1287 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 NYAP1Q6ZVC0 841 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 RBFAQ8N0V3 343 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 PDCD7Q8N8D1 485 aaKnown RBP19.83■□□□□ 0.77
COL9A3-202ENST00000452372 GLIS1Q8NBF1 620 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 OR1E3Q8WZA6 343 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 HIC2Q96JB3 615 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 ETNK1Q9HBU6 452 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 FGF22Q9HCT0 170 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 PAK5Q9P286 719 aa19.83■□□□□ 0.77
COL9A3-202ENST00000452372 FEZ2Q9UHY8 353 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-202ENST00000452372 SCN8AQ9UQD0 1980 aa19.83■□□□□ 0.76
COL9A3-202ENST00000452372 ERI2A8K979 691 aaKnown RBP19.82■□□□□ 0.76
COL9A3-202ENST00000452372 USP12O75317 370 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 TNFP01375 233 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 SLC4A1P02730 911 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 CEACAM5P06731 702 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 BPIP17213 487 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 TCP1P17987 556 aaKnown RBP19.82■□□□□ 0.76
COL9A3-202ENST00000452372 PRRT3Q5FWE3 981 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 PAPD7Q5XG87 772 aaKnown RBP19.82■□□□□ 0.76
COL9A3-202ENST00000452372 KCTD16Q68DU8 428 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 C4orf22Q6V702 233 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 RD3Q7Z3Z2 195 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 GLT6D1Q7Z4J2 308 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 PRUNE1Q86TP1 453 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 TAB3Q8N5C8 712 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-202ENST00000452372 MDM1Q8TC05 714 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 LMX1AQ8TE12 382 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms