RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TCAF2A6NFQ2 919 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 TMEM221A6NGB7 291 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 M0R296 226 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 ENTPD5O75356 428 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 RPP40O75818 363 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 PIGNO95427 931 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 RHOCP08134 193 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 EZRP15311 586 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 RAP1GDS1P52306 607 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 DNAJB13P59910 316 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 PRKAA1Q13131 559 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 ZNF177Q13360 481 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 CSHL1Q14406 222 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 CFAP157Q5JU67 520 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 CXorf57Q6NSI4 855 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 LDB1Q86U70 411 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 BBS7Q8IWZ6 715 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 BRSK1Q8TDC3 778 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 BLOC1S5Q8TDH9 187 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 CSGALNACT1Q8TDX6 532 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 UBXN10Q96LJ8 280 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 TBATAQ96M53 351 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 UNKQ9C0B0 810 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 C1orf21Q9H246 121 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 SUDS3Q9H7L9 328 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 TRPV5Q9NQA5 729 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 NOP53Q9NZM5 478 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 STOML2Q9UJZ1 356 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 CCDC162PA2VCL2 907 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 SHISA7A6NL88 538 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 GRID2O43424 1007 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 NPHS1O60500 1241 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 GOT2P00505 430 aaKnown RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 LTA4HP09960 611 aaKnown RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 CD72P21854 359 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ATP5F1P24539 256 aaPredicted RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 CPOXP36551 454 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 PGM1P36871 562 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 RPL14P50914 215 aaKnown RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 CDKN2DP55273 166 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ASPHQ12797 758 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 RUNX3Q13761 415 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 PTPRCAPQ14761 206 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 CYTH1Q15438 398 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 FAM83EQ2M2I3 478 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ACCSLQ4AC99 568 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 DNAL1Q4LDG9 190 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ARHGAP24Q8N264 748 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 PDCD6IPQ8WUM4 868 aaKnown RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 NUDCD1Q96RS6 583 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 VWA7Q9Y334 891 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 HDAC3O15379 428 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 INSIG1O15503 277 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ZBTB14O43829 449 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 TSPAN3O60637 253 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ANP32DO95626 131 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 PIRTP0C851 137 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 TPBGLP0DKB5 382 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ZNF140P52738 457 aaPredicted RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 NSUN2Q08J23 767 aaKnown RBP eCLIP10.69□□□□□ -0.7
PKP4-206ENST00000452162 ILF2Q12905 390 aaKnown RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 SEMA3AQ14563 771 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 PDGFRLQ15198 375 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 MLF2Q15773 248 aaPredicted RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 AGAP9Q5VTM2 703 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 METTL21CQ5VZV1 264 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 TMEM207Q6UWW9 146 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 HTR3DQ70Z44 454 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ADGRG2Q8IZP9 1017 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 OR13C4Q8NGS5 318 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 AGR3Q8TD06 166 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ANKRD49Q8WVL7 239 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 OR52B2Q96RD2 323 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 GPAMQ9HCL2 828 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 ZDHHC2Q9UIJ5 367 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.69□□□□□ -0.7
PKP4-206ENST00000452162 SPO11Q9Y5K1 396 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 PIAS3Q9Y6X2 628 aa10.69□□□□□ -0.7
PKP4-206ENST00000452162 CD3EAPO15446 510 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 BUD23O43709 281 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 TM7SF2O76062 418 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 LATS1O95835 1130 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 CD160O95971 181 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 PRLP01236 227 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 CCDC166P0CW27 439 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 GNAZP19086 355 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 OGNP20774 298 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 FDXRP22570 491 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 PSMA3P25788 255 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SLC26A3P40879 764 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 KPNB1Q14974 876 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 ITPRIPL2Q3MIP1 535 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 KHDC1Q4VXA5 237 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 RNF219Q5W0B1 726 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 SEL1L3Q68CR1 1132 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 FAM45BPQ6NSW5 357 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 ZNF549Q6P9A3 640 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 Q6ZNB5 142 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 TPRG1Q6ZUI0 275 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 PIWIL4Q7Z3Z4 852 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms