RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KIAA0355O15063 1070 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SHOXO15266 292 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LIASO43766 372 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SNX4O95219 450 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ATE1O95260 518 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 METTL18O95568 372 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CYP11A1P05108 521 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC2A2P11168 524 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ITGA4P13612 1032 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NCF1P14598 390 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 SAT1P21673 171 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC2A5P22732 501 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ATP5F1P24539 256 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 UQCRC1P31930 480 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FNTBP49356 437 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC26A2P50443 739 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TUBP50607 506 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LIMK2P53671 638 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CDH11P55287 796 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ERVK-21P61565 698 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MRPS10P82664 201 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 TFAMQ00059 246 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 RHDQ02161 417 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC18A2Q05940 514 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SMARCB1Q12824 385 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CAMK2BQ13554 666 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZMYND11Q15326 602 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TLR1Q15399 786 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TRAM1Q15629 374 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ATP6AP1Q15904 470 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SETMARQ53H47 684 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC35F1Q5T1Q4 408 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LRIF1Q5T3J3 769 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GPR158Q5T848 1215 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OGFOD2Q6N063 350 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ADGRD2Q7Z7M1 963 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KSR1Q8IVT5 923 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC22A15Q8IZD6 547 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF655Q8N720 491 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF283Q8N7M2 679 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TEX19Q8NA77 164 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OR5T1Q8NG75 326 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OR13J1Q8NGT2 312 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OR5H6Q8NGV6 325 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TSPEARQ8WU66 669 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DCAKDQ8WVC6 231 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZFPM2Q8WW38 1151 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC25A36Q96CQ1 311 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RCN3Q96D15 328 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DCAF5Q96JK2 942 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DMRTB1Q96MA1 342 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AGAP2Q99490 1192 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 COPS4Q9BT78 406 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IFT27Q9BW83 186 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PRKD2Q9BZL6 878 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC6A17Q9H1V8 727 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DSN1Q9H410 356 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SMURF1Q9HCE7 757 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 WDR6Q9NNW5 1121 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 EMC7Q9NPA0 242 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LATS2Q9NRM7 1088 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RAB6BQ9NRW1 208 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TOPORSQ9NS56 1045 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ABCD2Q9UBJ2 740 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CYB5R1Q9UHQ9 305 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SIX4Q9UIU6 781 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CA5BQ9Y2D0 317 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AXIN2Q9Y2T1 843 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SUGT1Q9Y2Z0 365 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DHRS7Q9Y394 339 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 HSPB11Q9Y547 144 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IRAK3Q9Y616 596 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ALG5Q9Y673 324 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CNTNAP1P78357 1384 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RIC1Q4ADV7 1423 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MEGF6O75095 1541 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FABP12A6NFH5 140 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DISC1C4P0D8 188 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KBTBD13C9JR72 458 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IMPA2O14732 288 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DYNC1LI2O43237 492 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ACSL4O60488 711 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF254O75437 659 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NDST3O95803 873 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 HMGCRP04035 888 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PCCAP05165 728 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 CYP2C8P10632 490 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RBP3P10745 1247 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FCER1AP12319 257 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LBPP18428 481 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CD58P19256 250 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CES1P23141 567 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IGFBP5P24593 272 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 HNF1BP35680 557 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ETV6P41212 452 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SEPHS1P49903 392 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 P2RX3P56373 397 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 INHBEP58166 350 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CSTF1Q05048 431 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 CBLBQ13191 982 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms