RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ITPRIPL2Q3MIP1 535 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 PREPLQ4J6C6 727 aaPredicted RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 CES4AQ5XG92 561 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 LRRC8EQ6NSJ5 796 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 FAM151BQ6UXP7 276 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 MTSS1LQ765P7 747 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SNX20Q7Z614 316 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 ZNF366Q8N895 744 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 HEXDCQ8WVB3 486 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 UCMAQ8WVF2 138 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SREK1Q8WXA9 508 aaKnown RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 SCYL1Q96KG9 808 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 MRPL57Q9BQC6 102 aaKnown RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 PLCD4Q9BRC7 762 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 THAP1Q9NVV9 213 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 KLHL14Q9P2G3 628 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 CPSF2Q9P2I0 782 aaKnown RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 B4GALT6Q9UBX8 382 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 DENND4AQ7Z401 1863 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 EDDM13A0A1B0GTR0 161 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TK2O00142 265 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 ARNTLO00327 626 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SERPINE1P05121 402 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SBK3P0C264 359 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TROVE2P10155 538 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP39-207ENST00000450066 MYL2P10916 166 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 RALBP11234 206 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 ITGALP20701 1170 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 CD9P21926 228 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 PPARGP37231 505 aaPredicted RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 CSHL1Q14406 222 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 GPR33Q49SQ1 333 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 ZDHHC20Q5W0Z9 365 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 NAIF1Q69YI7 327 aaPredicted RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 KLC3Q6P597 504 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TMEM207Q6UWW9 146 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 ZYG11AQ6WRX3 759 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 PIM3Q86V86 326 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SPATA6LQ8N4H0 392 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SMRP1Q8NCR6 262 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 OR6Y1Q8NGX8 325 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TTC1Q99614 292 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 RPP25Q9BUL9 199 aaKnown RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 MRPL46Q9H2W6 279 aaKnown RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 TTYH1Q9H313 450 aaPredicted RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 TMEM245Q9H330 911 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 OXSMQ9NWU1 459 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TAS2R13Q9NYV9 303 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 EPS15L1Q9UBC2 864 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 COMMD10Q9Y6G5 202 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SCN8AQ9UQD0 1980 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TMEM265A0A087WTH1 108 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 TRBV5-4A0A0C4DH59 114 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 UPK3BL1B0FP48 263 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 UPK3BL2E5RIL1 263 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 OR1I1O60431 355 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ESR1P03372 595 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 PRNPP04156 253 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 CYP2A6P11509 494 aaPredicted RBP14.18□□□□□ -0.14
USP39-207ENST00000450066 PKMP14618 531 aaKnown RBP14.18□□□□□ -0.14
USP39-207ENST00000450066 TIMP2P16035 220 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ZNF30P17039 623 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 SEMG2Q02383 582 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ZNF234Q14588 700 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 GRIN2CQ14957 1233 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ACAP2Q15057 778 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 C9orf64Q5T6V5 341 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 LYPLAL1Q5VWZ2 237 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ZCCHC23Q6ZST2 131 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 SFTPA1Q8IWL2 248 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ANKRD49Q8WVL7 239 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 CHFRQ96EP1 664 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 PLEKHG4BQ96PX9 1271 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ASB8Q9H765 288 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 XPR1Q9UBH6 696 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 MED16Q9Y2X0 877 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 MUC22E2RYF6 1773 aaPredicted RBP14.18□□□□□ -0.14
USP39-207ENST00000450066 ZNF106Q9H2Y7 1883 aaKnown RBP14.18□□□□□ -0.14
USP39-207ENST00000450066 EYSQ5T1H1 3165 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 GPR39O43194 453 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 TRIM13O60858 407 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 H2AFYO75367 372 aaKnown RBP14.18□□□□□ -0.14
USP39-207ENST00000450066 RHOBTB1O94844 696 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 KAT7O95251 611 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 VIPR1P32241 457 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 GRIA2P42262 883 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 OVGP1Q12889 678 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 IFT88Q13099 833 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 PDAP1Q13442 181 aaKnown RBP14.18□□□□□ -0.14
USP39-207ENST00000450066 ADGRE1Q14246 886 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 GLIPR1L2Q4G1C9 344 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 TMIEQ8NEW7 156 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 ZNF398Q8TD17 642 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 TRIM55Q9BYV6 548 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 P2RY12Q9H244 342 aa14.18□□□□□ -0.14
USP39-207ENST00000450066 PCDH12Q9NPG4 1184 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms