RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SIT1Q9Y3P8 196 aa19.19■□□□□ 0.66
RPS28-202ENST00000449223 SLC30A1Q9Y6M5 507 aa19.19■□□□□ 0.66
RPS28-202ENST00000449223 TRPM6Q9BX84 2022 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 MUC3AQ02505 3323 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 IQANK1A0A1B0GTG1 560 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 HMX2A2RU54 273 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 NEMP1O14524 444 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 WNT9AO14904 365 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 RGS16O15492 202 aaPredicted RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 KRT37O76014 449 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 S1PR4O95977 384 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 AHSGP02765 367 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ACADMP11310 421 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ITGALP20701 1170 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 SPRP35270 261 aaPredicted RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 ETV3P41162 512 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 TTPAP49638 278 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ADPRHP54922 357 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ADARP55265 1226 aaKnown RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 DPTQ07507 201 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 DNAJC3Q13217 504 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 CTBP1Q13363 440 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ITGA9Q13797 1035 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 SEMA3AQ14563 771 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 RNF187Q5TA31 235 aaPredicted RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 LGSNQ5TDP6 509 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 KIAA1161Q6NSJ0 714 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 FAM151BQ6UXP7 276 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 TAOK1Q7L7X3 1001 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 SDCCAG8Q86SQ7 713 aaPredicted RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 ZC3HC1Q86WB0 502 aaKnown RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 PIANPQ8IYJ0 282 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 GOLGA6L1Q8N7Z2 621 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 CXorf40AQ8TE69 158 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ZSCAN5AQ9BUG6 496 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 FAM83DQ9H4H8 585 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 ITM2CQ9NQX7 267 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 CORO1CQ9ULV4 474 aaPredicted RBP19.18■□□□□ 0.66
RPS28-202ENST00000449223 NCKAP1Q9Y2A7 1128 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 VPS9D1Q9Y2B5 631 aa19.18■□□□□ 0.66
RPS28-202ENST00000449223 SMIM23A6NLE4 172 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 SNRPAP09012 282 aaKnown RBP19.17■□□□□ 0.66
RPS28-202ENST00000449223 ATP5DP30049 168 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 TPMTP51580 245 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 SMAD1Q15797 465 aaKnown RBP19.17■□□□□ 0.66
RPS28-202ENST00000449223 MAP7D1Q3KQU3 841 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 PSAPL1Q6NUJ1 521 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 RFLNAQ6ZTI6 216 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 CYP4X1Q8N118 509 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.17■□□□□ 0.66
RPS28-202ENST00000449223 ISL2Q96A47 359 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 ARL8AQ96BM9 186 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 TLCD1Q96CP7 247 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 ATP6V1G3Q96LB4 118 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 NECAB3Q96P71 396 aaPredicted RBP19.17■□□□□ 0.66
RPS28-202ENST00000449223 WRAP53Q9BUR4 548 aaKnown RBP19.17■□□□□ 0.66
RPS28-202ENST00000449223 C2orf42Q9NWW7 574 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 DLGAP2Q9P1A6 1054 aa19.17■□□□□ 0.66
RPS28-202ENST00000449223 MMP20O60882 483 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
RPS28-202ENST00000449223 ITGA2BP08514 1039 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 CD151P48509 253 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 POLD2P49005 469 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 MPP1Q00013 466 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 CHRNA6Q15825 494 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 TMEM259Q4ZIN3 620 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 HSP90B2PQ58FF3 399 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 TTMPQ5BVD1 217 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 LYPLAL1Q5VWZ2 237 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 TIFABQ6ZNK6 161 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 MICALCLQ6ZW33 695 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.16■□□□□ 0.66
RPS28-202ENST00000449223 TRAM1L1Q8N609 369 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 TSTD1Q8NFU3 115 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 ZNF398Q8TD17 642 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 HMGB4Q8WW32 186 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 MRRFQ96E11 262 aaKnown RBP19.16■□□□□ 0.66
RPS28-202ENST00000449223 VPS35Q96QK1 796 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 GPR22Q99680 433 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 ASB8Q9H765 288 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 SENP1Q9P0U3 644 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 EBF1Q9UH73 591 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 TBK1Q9UHD2 729 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 ACTL7BQ9Y614 415 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 TECTAO75443 2155 aa19.16■□□□□ 0.66
RPS28-202ENST00000449223 PLXND1Q9Y4D7 1925 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 HMGB1P1B2RPK0 211 aaPredicted RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 PFDN6O15212 129 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 PPARGP37231 505 aaPredicted RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 RPS21P63220 83 aaKnown RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 ACOX1Q15067 660 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 TMED2Q15363 201 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 ZRANB3Q5FWF4 1079 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 CWF19L1Q69YN2 538 aaKnown RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 KIAA1324Q6UXG2 1013 aaKnown RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 TRABD2AQ86V40 505 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 CAMKK1Q8N5S9 505 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 OR14C36Q8NHC7 312 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 ASB12Q8WXK4 309 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 LPGAT1Q92604 370 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms