RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 PCDH12Q9NPG4 1184 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 PISDQ9UG56 409 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 TUBD1Q9UJT1 453 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 ITM2BQ9Y287 266 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.42
SSR4-205ENST00000447375 CFAP69A5D8W1 941 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 A6NNZ2 444 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 APOC4-APOC2K7ER74 178 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 NTN3O00634 580 aaPredicted RBP12.45□□□□□ -0.42
SSR4-205ENST00000447375 DDX3YO15523 660 aaKnown RBP12.45□□□□□ -0.42
SSR4-205ENST00000447375 MMP20O60882 483 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 FTCDO95954 541 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 APOC2P02655 101 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 HLA-DQB2P05538 268 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 XPAP23025 273 aaPredicted RBP12.45□□□□□ -0.42
SSR4-205ENST00000447375 CETN2P41208 172 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 ITKQ08881 620 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 TRAF2Q12933 501 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 ZBTB17Q13105 803 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 SGCGQ13326 291 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 LRRC73Q5JTD7 316 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 ERAP2Q6P179 960 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 PTAR1Q7Z6K3 402 aaPredicted RBP12.45□□□□□ -0.42
SSR4-205ENST00000447375 TFB1MQ8WVM0 346 aaKnown RBP12.45□□□□□ -0.42
SSR4-205ENST00000447375 MIB2Q96AX9 1013 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 BMFQ96LC9 184 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 PACSIN2Q9UNF0 486 aaPredicted RBP12.45□□□□□ -0.42
SSR4-205ENST00000447375 PPIL1Q9Y3C6 166 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 HS3ST3A1Q9Y663 406 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 LRP4O75096 1905 aa12.45□□□□□ -0.42
SSR4-205ENST00000447375 PRAMEF33A0A0G2JMD5 474 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 SPTY2D1-AS1A0A0U1RR47 76 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 MTSS1O43312 755 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 FZD6O60353 706 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 PRAMEF10O60809 474 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 TJP3O95049 919 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 PGLSO95336 258 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 JUNDP17535 347 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
SSR4-205ENST00000447375 MMP12P39900 470 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 DSC2Q02487 901 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 NIPAL4Q0D2K0 466 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 XRCC4Q13426 336 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 AADACL2Q6P093 401 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 PARGQ86W56 976 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 DTX1Q86Y01 620 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 SLC35F3Q8IY50 421 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 ANP32BQ92688 251 aaKnown RBP12.44□□□□□ -0.42
SSR4-205ENST00000447375 CENPTQ96BT3 561 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 PDLIM2Q96JY6 352 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 KLF6Q99612 283 aaPredicted RBP12.44□□□□□ -0.42
SSR4-205ENST00000447375 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
SSR4-205ENST00000447375 SLC12A9Q9BXP2 914 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 FOXP3Q9BZS1 431 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 LZTFL1Q9NQ48 299 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 ZNF71Q9NQZ8 489 aaPredicted RBP12.44□□□□□ -0.42
SSR4-205ENST00000447375 KLF15Q9UIH9 416 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 PHTF1Q9UMS5 762 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 PPP2R2CQ9Y2T4 447 aa12.44□□□□□ -0.42
SSR4-205ENST00000447375 ZFC3H1O60293 1989 aaKnown RBP12.43□□□□□ -0.42
SSR4-205ENST00000447375 HACD1B0YJ81 288 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 RAD51BO15315 384 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 TM7SF2O76062 418 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 AGFG2O95081 481 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 PRKCGP05129 697 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 MMP2P08253 660 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 ITIH1P19827 911 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 CD97P48960 835 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 LIG3P49916 1009 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 WASHC5Q12768 1159 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 RALGDSQ12967 914 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 AGERQ15109 404 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 ARMC12Q5T9G4 340 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 B4GALNT4Q76KP1 1039 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 DPPA4Q7L190 304 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 ZC3H18Q86VM9 953 aaKnown RBP12.43□□□□□ -0.42
SSR4-205ENST00000447375 CBARPQ8N350 705 aaPredicted RBP12.43□□□□□ -0.42
SSR4-205ENST00000447375 DENND6BQ8NEG7 585 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 CXorf40AQ8TE69 158 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 PDCD6IPQ8WUM4 868 aaKnown RBP12.43□□□□□ -0.42
SSR4-205ENST00000447375 PIH1D2Q8WWB5 315 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 SCRN2Q96FV2 425 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 IMP4Q96G21 291 aaKnown RBP12.43□□□□□ -0.42
SSR4-205ENST00000447375 TEKT5Q96M29 485 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 AGAP3Q96P47 875 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
SSR4-205ENST00000447375 GPR27Q9NS67 375 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 SPASTQ9UBP0 616 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 PADI4Q9UM07 663 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 LOXL2Q9Y4K0 774 aa12.43□□□□□ -0.42
SSR4-205ENST00000447375 POM121BA6NF01 834 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 CPP00450 1065 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 PRLP01236 227 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 PDHA1P08559 390 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 NFKBIAP25963 317 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 PTPN3P26045 913 aa12.42□□□□□ -0.42
SSR4-205ENST00000447375 RPL26P61254 145 aaKnown RBP12.42□□□□□ -0.42
SSR4-205ENST00000447375 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms