RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 AGGF1Q8N302 714 aaeCLIP17.17■□□□□ 0.34
LIME1-202ENST00000444951 OR4K2Q8NGD2 314 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 OR13C4Q8NGS5 318 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 CAMK1GQ96NX5 476 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 TRIM56Q9BRZ2 755 aaKnown RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 FRMD8Q9BZ67 464 aaPredicted RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 SAYSD1Q9NPB0 183 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 FZD3Q9NPG1 666 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 PKD2L2Q9NZM6 624 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 PKP3Q9Y446 797 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 TCAF1Q9Y4C2 921 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 DMXL2Q8TDJ6 3036 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 MEI4A8MW99 385 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 PPFIA2O75334 1257 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 RECQL5O94762 991 aaPredicted RBP17.16■□□□□ 0.34
LIME1-202ENST00000444951 PAK4O96013 591 aaPredicted RBP17.16■□□□□ 0.34
LIME1-202ENST00000444951 ELK3P41970 407 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 MAGEA3P43357 314 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 ATXN3P54252 364 aaPredicted RBP17.16■□□□□ 0.34
LIME1-202ENST00000444951 SIM1P81133 766 aaPredicted RBP17.16■□□□□ 0.34
LIME1-202ENST00000444951 ZNF284Q2VY69 593 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 NEK5Q6P3R8 708 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 MICALCLQ6ZW33 695 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 GATA6Q92908 595 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 STAMBPL1Q96FJ0 436 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 CFAP36Q96G28 342 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 DNAJC1Q96KC8 554 aaKnown RBP17.16■□□□□ 0.34
LIME1-202ENST00000444951 SIGLEC10Q96LC7 697 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 COQ10AQ96MF6 247 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 ZNF778Q96MU6 729 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 SLC17A9Q9BYT1 436 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 SLC2A6Q9UGQ3 507 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 FREM2Q5SZK8 3169 aa17.16■□□□□ 0.34
LIME1-202ENST00000444951 KNL1Q8NG31 2342 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 WNT9AO14904 365 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 NMBRP28336 390 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 HMGCLP35914 325 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 SPINT3P49223 89 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 FGL2Q14314 439 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 FASTKD3Q14CZ7 662 aaKnown RBP17.15■□□□□ 0.34
LIME1-202ENST00000444951 TMEM259Q4ZIN3 620 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 TSTD2Q5T7W7 516 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 TRIM69Q86WT6 500 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 IGDCC3Q8IVU1 814 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 BIRC7Q96CA5 298 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 NUS1Q96E22 293 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 RANBP9Q96S59 729 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 FMO2Q99518 471 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 SLC32A1Q9H598 525 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 DNAAF2Q9NVR5 837 aaKnown RBP17.15■□□□□ 0.34
LIME1-202ENST00000444951 IL17CQ9P0M4 197 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 KLK13Q9UKR3 277 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 ZMIZ1Q9ULJ6 1067 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 SLCO1B1Q9Y6L6 691 aa17.15■□□□□ 0.34
LIME1-202ENST00000444951 MROH6A6NGR9 719 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 PSMD11O00231 422 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 PCCBP05166 539 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 IGHV4-34P06331 123 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 MYBL2P10244 700 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 BPIP17213 487 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 GM2AP17900 193 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 ECHS1P30084 290 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 CCR5P51681 352 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 ZNF140P52738 457 aaPredicted RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 VSNL1P62760 191 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 PDE1BQ01064 536 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 BNC1Q01954 994 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 GRIK2Q13002 908 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 LAMB3Q13751 1172 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 SETMARQ53H47 684 aaPredicted RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 ESRP1Q6NXG1 681 aaKnown RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 FAM151BQ6UXP7 276 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 CAPN12Q6ZSI9 719 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 TECPR1Q7Z6L1 1165 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 RABEPKQ7Z6M1 372 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 GPR26Q8NDV2 337 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 FBXO36Q8NEA4 188 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 DNASE2BQ8WZ79 361 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 SCAMP4Q969E2 229 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 ZNF669Q96BR6 464 aaPredicted RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 DTD2Q96FN9 168 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 EBNA1BP2Q99848 306 aaKnown RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 RIOK2Q9BVS4 552 aaKnown RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 C1QTNF2Q9BXJ5 285 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 MIR1-1HGQ9H1L0 117 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 FKBPLQ9UIM3 349 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 SOX13Q9UN79 622 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 CA5BQ9Y2D0 317 aa17.14■□□□□ 0.33
LIME1-202ENST00000444951 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.14■□□□□ 0.33
LIME1-202ENST00000444951 LRRK1Q38SD2 2015 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 LAMA5O15230 3695 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 METTL12A8MUP2 240 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 RAD51BO15315 384 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 SH3BP5O60239 455 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 SKIDA1Q1XH10 827 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms