RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SLC22A17Q8WUG5 538 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 CLP1Q92989 425 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 CATSPER2Q96P56 530 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 GPR21Q99679 349 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 ERVK-6Q9BXR3 956 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 GSTO2Q9H4Y5 243 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 MAGEE1Q9HCI5 957 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 C15orf41Q9Y2V0 281 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 MED16Q9Y2X0 877 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 A0A088AWK7 358 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 RGSL1A5PLK6 1076 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 UBXN8O00124 270 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 SDHDO14521 159 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 SLC22A2O15244 555 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 VPS26AO75436 327 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 CYBBP04839 570 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 PKMP14618 531 aaKnown RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 ADSLP30566 484 aaPredicted RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 HMGCLP35914 325 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 PLEKHG6Q3KR16 790 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 C1orf146Q5VVC0 180 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 TAS2R42Q7RTR8 314 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 KIRREL3Q8IZU9 778 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 CPSF7Q8N684 471 aaKnown RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 PTGR2Q8N8N7 351 aaPredicted RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 FIBINQ8TAL6 211 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 STAG3L4Q8TBR4 150 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 MAELQ96JY0 434 aaKnown RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 BIRC8Q96P09 236 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 RTKNQ9BST9 563 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 DERL2Q9GZP9 239 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 SMG9Q9H0W8 520 aaKnown RBP13.62□□□□□ -0.23
RBM39-216ENST00000444878 IL17CQ9P0M4 197 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 SLC30A1Q9Y6M5 507 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 LAMA3Q16787 3333 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 SCN8AQ9UQD0 1980 aa13.62□□□□□ -0.23
RBM39-216ENST00000444878 OR1I1O60431 355 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 KRT36O76013 467 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PSMG1O95456 288 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PRAMEF12O95522 483 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ALPIP09923 528 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 GFAPP14136 432 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PFKLP17858 780 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 GNAZP19086 355 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 CD70P32970 193 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 MAPK8P45983 427 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ERVFC1P60507 584 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ATP6V0D1P61421 351 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 SATB1Q01826 763 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 BTKQ06187 659 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 RCN1Q15293 331 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 CCDC6Q16204 474 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PFKFB4Q16877 469 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 SETMARQ53H47 684 aaPredicted RBP13.61□□□□□ -0.23
RBM39-216ENST00000444878 UNC50Q53HI1 259 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PPM1LQ5SGD2 360 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 LYSMD3Q7Z3D4 306 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 METTL3Q86U44 580 aaKnown RBP13.61□□□□□ -0.23
RBM39-216ENST00000444878 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 CFAP61Q8NHU2 1237 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PIH1D2Q8WWB5 315 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 KIAA1191Q96A73 305 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ATOH8Q96SQ7 321 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 TNFRSF12AQ9NP84 129 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 RNF112Q9ULX5 631 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 TRAF6Q9Y4K3 522 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 KERAO60938 352 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 NIPSNAP2O75323 286 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 IGSF6O95976 241 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 TSPAN8P19075 237 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ITGAXP20702 1163 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 CLCN4P51793 760 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PLPP4Q5VZY2 271 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 RIPOR1Q6ZS17 1223 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 SNX32Q86XE0 403 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 CMTM8Q8IZV2 173 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 NKAPQ8N5F7 415 aaKnown RBP13.61□□□□□ -0.23
RBM39-216ENST00000444878 RP9Q8TA86 221 aaKnown RBP13.61□□□□□ -0.23
RBM39-216ENST00000444878 ACTRT2Q8TDY3 377 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.61□□□□□ -0.23
RBM39-216ENST00000444878 MARK4Q96L34 752 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ASB2Q96Q27 587 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 PANX3Q96QZ0 392 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 ZNF385DQ9H6B1 395 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 HCFC1R1Q9NWW0 138 aa13.61□□□□□ -0.23
RBM39-216ENST00000444878 TRMT6Q9UJA5 497 aaKnown RBP13.61□□□□□ -0.23
RBM39-216ENST00000444878 OAS3Q9Y6K5 1087 aaKnown RBP13.61□□□□□ -0.23
RBM39-216ENST00000444878 HIDE1A8MVS5 230 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 SUPT3HB4E1H0 165 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 E5RI56 91 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 UBFD1O14562 309 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 SUPT3HO75486 399 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 SIX3O95343 332 aaPredicted RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 MTHFD2P13995 350 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CHRM3P20309 590 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms