RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NUDT2P50583 147 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DRG2P55039 364 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 HADHBP55084 474 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 SNRPD2P62316 118 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 RNF4P78317 190 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TARDBPQ13148 414 aaKnown RBP eCLIP2.77□□□□□ -1.97
LIG4-203ENST00000442234 TRIM28Q13263 835 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 GRB10Q13322 594 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PPP2R5DQ14738 602 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GRM7Q14831 915 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PCBP1Q15365 356 aaKnown RBP eCLIP2.77□□□□□ -1.97
LIG4-203ENST00000442234 CA9Q16790 459 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 KNOP1Q1ED39 458 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 LEXMQ3ZCV2 418 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GRTP1Q5TC63 336 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 AGAP6Q5VW22 663 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RAP1GAP2Q684P5 730 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GPAT2Q6NUI2 795 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DPH6Q7L8W6 267 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SSX9Q7RTT3 188 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PAGE2Q7Z2X7 111 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZNF438Q7Z4V0 828 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FBXO33Q7Z6M2 555 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TRABD2AQ86V40 505 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TAGAPQ8N103 731 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 OR8H2Q8N162 312 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 VGLL2Q8N8G2 317 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PCSK9Q8NBP7 692 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 TP53I13Q8NBR0 393 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 SLC2A14Q8TDB8 520 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TCP10LQ8TDR4 215 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ING5Q8WYH8 240 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LPAR1Q92633 364 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FATE1Q969F0 183 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZNF566Q969W8 418 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZUFSPQ96AP4 578 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TOE1Q96GM8 510 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 HES6Q96HZ4 224 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CNDP1Q96KN2 507 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZDHHC15Q96MV8 337 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SPATA33Q96N06 139 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PWWP2AQ96N64 755 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZNF641Q96N77 438 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 FOPNLQ96NB1 174 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 AGAP4Q96P64 663 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FAM111AQ96PZ2 611 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CDRT15Q96T59 188 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 BEX2Q9BXY8 128 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 AGXT2Q9BYV1 514 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.77□□□□□ -1.97
LIG4-203ENST00000442234 NAA50Q9GZZ1 169 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 INTS2Q9H0H0 1204 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 CLEC4MQ9H2X3 399 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 CD93Q9NPY3 652 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PRMT8Q9NR22 394 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 SH3GLB2Q9NR46 395 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 UFSP2Q9NUQ7 469 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TAS2R7Q9NYW3 318 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NINJ2Q9NZG7 142 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 IL37Q9NZH6 218 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ADA2Q9NZK5 511 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PSMC3IPQ9P2W1 217 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 LAMP5Q9UJQ1 280 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CDH7Q9ULB5 785 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DERAQ9Y315 318 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 AFG3L2Q9Y4W6 797 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ICE1Q9Y2F5 2266 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ATRQ13535 2644 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PLOD2O00469 737 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 COPEO14579 308 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FPGTO14772 594 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ANGPT2O15123 496 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 BET1O15155 118 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 MAGEB2O15479 319 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GPR37L1O60883 481 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 OR2B3O76000 313 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PDE9AO76083 593 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SLITRK5O94991 958 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LCKP06239 509 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 INHBAP08476 426 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CD48P09326 243 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 XRCC5P13010 732 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 NCAM1P13591 858 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TNNI3P19429 210 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DDX6P26196 483 aaKnown RBP eCLIP2.77□□□□□ -1.97
LIG4-203ENST00000442234 MSX2P35548 267 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 PPP3CCP48454 512 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ITGA8P53708 1063 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CDKL1Q00532 357 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CAV1Q03135 178 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RELQ04864 619 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 PMS2P3Q13401 168 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CCNIQ14094 377 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 IKBKEQ14164 716 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SELPLGQ14242 412 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GALNT3Q14435 633 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 MESDQ14696 234 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RTN1Q16799 776 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 BTBD16Q32M84 506 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 HSD17B12Q53GQ0 312 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms