RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 LOC105371267A0A1B0GV96 52 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 PTGES3LE9PB15 166 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 H0Y858 1186 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 DDHD2O94830 711 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 SPNP16150 400 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 NCK1P16333 377 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 GSTM2P28161 218 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 GJA9P57773 515 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 ILF2Q12905 390 aaKnown RBP16.76■□□□□ 0.27
PMS1-213ENST00000441310 SLC12A1Q13621 1099 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 FSTL5Q8N475 847 aaPredicted RBP16.76■□□□□ 0.27
PMS1-213ENST00000441310 NDRG1Q92597 394 aaKnown RBP16.76■□□□□ 0.27
PMS1-213ENST00000441310 TP53INP1Q96A56 240 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 FTHL17Q9BXU8 183 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 HACD3Q9P035 362 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 XPR1Q9UBH6 696 aa16.76■□□□□ 0.27
PMS1-213ENST00000441310 ATXN1P54253 815 aaKnown RBP16.75■□□□□ 0.27
PMS1-213ENST00000441310 VBP1P61758 197 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 RETREG3Q86VR2 466 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 SPNS2Q8IVW8 549 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 DEPDC4Q8N2C3 294 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 TRPV3Q8NET8 790 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 VMP1Q96GC9 406 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 MYRFLQ96LU7 910 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 LRRC40Q9H9A6 602 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 MAGEE1Q9HCI5 957 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 RABL2BQ9UNT1 228 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 BOLA1Q9Y3E2 137 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 AQP12BA6NM10 295 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 RAD51BO15315 384 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 TBX1O43435 398 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 FYNP06241 537 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 GSNP06396 782 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 ABCB1P08183 1280 aaPredicted RBP16.75■□□□□ 0.27
PMS1-213ENST00000441310 DARSP14868 501 aaKnown RBP16.75■□□□□ 0.27
PMS1-213ENST00000441310 CRHBPP24387 322 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 PSMB4P28070 264 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 MRPS15P82914 257 aaKnown RBP16.75■□□□□ 0.27
PMS1-213ENST00000441310 ZNF460Q14592 562 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 BTBD8Q5XKL5 378 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 NOTUMQ6P988 496 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 CCDC103Q8IW40 242 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 AQP12AQ8IXF9 295 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 TMEM151AQ8N4L1 468 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 SLC22A17Q8WUG5 538 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 MCRS1Q96EZ8 462 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 VPS39Q96JC1 886 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 CPNE5Q9HCH3 593 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 FBRSL1Q9HCM7 1045 aaKnown RBP16.75■□□□□ 0.27
PMS1-213ENST00000441310 NMRK2Q9NPI5 230 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 SEC24AO95486 1093 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 YWHAQP27348 245 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 RABGGTBP53611 331 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 MAP2K5Q13163 448 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 GRM3Q14832 879 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 SOWAHAQ2M3V2 549 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 CEP78Q5JTW2 689 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 FAM45BPQ6NSW5 357 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 PAGE2Q7Z2X7 111 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 OR52K1Q8NGK4 314 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 FAM45AQ8TCE6 357 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 SDCCAG3Q96C92 435 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 SLC45A1Q9Y2W3 748 aa16.75■□□□□ 0.27
PMS1-213ENST00000441310 NEMP2A6NFY4 417 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 RRN3P2A6NIE6 340 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 NR5A2O00482 541 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ARPC2O15144 300 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 MLNP12872 115 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 LCP1P13796 627 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 CHRM3P20309 590 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 RFC2P35250 354 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ACAP2Q15057 778 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 DGUOKQ16854 277 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 AASDHQ4L235 1098 aaPredicted RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 LCLAT1Q6UWP7 414 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 CCDC81Q6ZN84 652 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ASCC1Q8N9N2 400 aaKnown RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 OR6Q1Q8NGQ2 317 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 HTR3CQ8WXA8 447 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ISL2Q96A47 359 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ZFP42Q96MM3 310 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 CYP4F12Q9HCS2 524 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 IARS2Q9NSE4 1012 aaKnown RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 MAGED1Q9Y5V3 778 aaPredicted RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 PMF1-BGLAPU3KQ54 211 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 FAM172BPA6NC97 362 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 C2CD4BA6NLJ0 364 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 MEIS3P2A8K0S8 358 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 TOMM70O94826 608 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 F2P00734 622 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 IFNA8P32881 189 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 STX1BP61266 288 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 SOX4Q06945 474 aaPredicted RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 USP10Q14694 798 aaKnown RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 SNX17Q15036 470 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 MEP1AQ16819 746 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 DPY19L1Q2PZI1 675 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ADPRMQ3LIE5 342 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms