RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TAC4Q86UU9 113 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TMEM151BQ8IW70 566 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SYCE1Q8N0S2 351 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 NUP93Q8N1F7 819 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 NAT16Q8N8M0 369 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ANKS4BQ8N8V4 417 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 KIF18AQ8NI77 898 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 IRGQQ8WZA9 623 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CENPIQ92674 756 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 NT5C3BQ969T7 300 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 FAM149B1Q96BN6 582 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 BIRC7Q96CA5 298 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ERLEC1Q96DZ1 483 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 XPO6Q96QU8 1125 aaKnown RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 OSBPL9Q96SU4 736 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TBCBQ99426 244 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 NPY6RQ99463 290 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CNPY3Q9BT09 278 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TTLL2Q9BWV7 592 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 C6orf106Q9H6K1 298 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ERVMER34-1Q9H9K5 563 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 L2HGDHQ9H9P8 463 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 KLHL11Q9NVR0 708 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 DONSONQ9NYP3 566 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TRPM5Q9NZQ8 1165 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SEPT10Q9P0V9 454 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CFAP97Q9P2B7 532 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 IP6K2Q9UHH9 426 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 AMFRQ9UKV5 643 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SNX12Q9UMY4 172 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 VPS4AQ9UN37 437 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SCML2Q9UQR0 700 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 MRFAP1Q9Y605 127 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SLCO1B1Q9Y6L6 691 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CNTRLQ7Z7A1 2325 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TCRBV7S2A1N4TA0A589 114 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 C3orf70A6NLC5 250 aaPredicted RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 MDM4O15151 490 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SPOPO43791 374 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 ENDOD1O94919 500 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 FSBPO95073 299 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 TNFSF15O95150 251 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 TRUB2O95900 331 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 TBX18O95935 607 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 IGLV3-25P01717 112 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 PYGMP11217 842 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 PRLRP16471 622 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 YWHAQP27348 245 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 CD38P28907 300 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SDC4P31431 198 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 ACSL1P33121 698 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 PCK1P35558 622 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 GJC1P36383 396 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 PTPN9P43378 593 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SULT1E1P49888 294 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 ARSEP51690 589 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SNX16P57768 344 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 YWHAZP63104 245 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 ZXDBP98169 803 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 TAF10Q12962 218 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 KIR3DS1Q14943 382 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 CLCA4Q14CN2 919 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 RPS6KA1Q15418 735 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SHBQ15464 509 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 CA9Q16790 459 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 CDO1Q16878 200 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SMTNL2Q2TAL5 461 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SLC25A52Q3SY17 297 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 DNTTIP2Q5QJE6 756 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 MANEAQ5SRI9 462 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 PRAMEF14Q5SWL7 426 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 CAPRIN2Q6IMN6 1127 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 RNF111Q6ZNA4 994 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 DENND5BQ6ZUT9 1274 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 BEND5Q7L4P6 421 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 NLRC3Q7RTR2 1065 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 TIPARPQ7Z3E1 657 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 FAM124AQ86V42 546 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 HEATR4Q86WZ0 1026 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SPPL2CQ8IUH8 684 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SLITRK4Q8IW52 837 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 RASGEF1CQ8N431 466 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 WDR36Q8NI36 951 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 C9orf43Q8TAL5 461 aaPredicted RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 DQX1Q8TE96 717 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 FAM172AQ8WUF8 416 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 UCMAQ8WVF2 138 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 RAPGEF5Q92565 580 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 FBXO32Q969P5 355 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 MS4A14Q96JA4 679 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 CEP295NLQ96MC4 621 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 BDH2Q9BUT1 245 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SNRNP25Q9BV90 132 aaKnown RBP4.85□□□□□ -1.63
PTPN4-206ENST00000441089 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 FBXO44Q9H4M3 255 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 USP29Q9HBJ7 922 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 POPDC2Q9HBU9 364 aa4.85□□□□□ -1.63
PTPN4-206ENST00000441089 SGK2Q9HBY8 427 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms