RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 H2AFVQ71UI9 128 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 DNAAF5Q86Y56 855 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 RAVER1Q8IY67 606 aaKnown RBP6.04□□□□□ -1.44
PTPRR-204ENST00000440835 MREGQ8N565 214 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 GRIN3AQ8TCU5 1115 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 LMX1AQ8TE12 382 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 VMP1Q96GC9 406 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 SPON2Q9BUD6 331 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 ZDHHC6Q9H6R6 413 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 CATSPERBQ9H7T0 1116 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 SEPT11Q9NVA2 429 aaKnown RBP6.04□□□□□ -1.44
PTPRR-204ENST00000440835 AKAP7Q9P0M2 348 aaPredicted RBP6.04□□□□□ -1.44
PTPRR-204ENST00000440835 COX16Q9P0S2 106 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 OR12D3Q9UGF7 316 aa6.04□□□□□ -1.44
PTPRR-204ENST00000440835 DOCK9Q9BZ29 2069 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 A0A0D9SEW6 157 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 LRRD1A4D1F6 860 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 POM121BA6NF01 834 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 IGLON5A6NGN9 336 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 PLD2O14939 933 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CAPN5O15484 640 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 WISP1O95388 367 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 PAK4O96013 591 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 GSTA1P08263 222 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 LIPCP11150 499 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 NQO1P15559 274 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TGM2P21980 687 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CCND1P24385 295 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TRA2AQ13595 282 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 FGL2Q14314 439 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 RFTN1Q14699 578 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 NFATC4Q14934 902 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 FAXCQ5TGI0 409 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 RNF220Q5VTB9 566 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 HGSNATQ68CP4 663 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 SAMD14Q8IZD0 417 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TP53I13Q8NBR0 393 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 OR7D4Q8NG98 312 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 GPBAR1Q8TDU6 330 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 IFT81Q8WYA0 676 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 GFM1Q96RP9 751 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 MAK16Q9BXY0 300 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 PHACTR1Q9C0D0 580 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 QPCTLQ9NXS2 382 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TUBD1Q9UJT1 453 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 NFS1Q9Y697 457 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 DMXL2Q8TDJ6 3036 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CPED1A4D0V7 1026 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 BTNL10A8MVZ5 291 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 K7ERQ8 282 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 GRAP2O75791 330 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TNFP01375 233 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CALB1P05937 261 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 PDHA1P08559 390 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 HK3P52790 923 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 NDST2P52849 883 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CLDN2P57739 230 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 POLR2LP62875 67 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 NOMO3P69849 1222 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CLN3Q13286 438 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 SQSTM1Q13501 440 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 NR1D2Q14995 579 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 LRRC14Q15048 493 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 FXNQ16595 210 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 POM121L1PQ3SYA9 428 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 RALGPS1Q5JS13 557 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 GUSBP11Q6P575 273 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 ALKBH5Q6P6C2 394 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 IRF2BP2Q7Z5L9 587 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CPLX4Q7Z7G2 160 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 SDCCAG8Q86SQ7 713 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 SLC47A2Q86VL8 602 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 SYCE1Q8N0S2 351 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 UMODL1-AS1Q8N2C9 162 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 RTL3Q8N8U3 475 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CCDC89Q8N998 374 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 SGF29Q96ES7 293 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TRIM11Q96F44 468 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 WDR92Q96MX6 357 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 RBM15Q96T37 977 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 AGPAT1Q99943 283 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CCDC3Q9BQI4 270 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 LRRC61Q9BV99 259 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TNKS2Q9H2K2 1166 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 LRRC4CQ9HCJ2 640 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 EPB41L5Q9HCM4 733 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 ADAM22Q9P0K1 906 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 DOLKQ9UPQ8 538 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CA5BQ9Y2D0 317 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 HEMK1Q9Y5R4 338 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CAPN6Q9Y6Q1 641 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 KNL1Q8NG31 2342 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TDRD6O60522 2096 aaKnown RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 CFAP73A6NFT4 308 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 D6RAR5 112 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 PDLIM1O00151 329 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 HGSO14964 777 aaPredicted RBP6.03□□□□□ -1.44
PTPRR-204ENST00000440835 RAD51BO15315 384 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 BNIP3LO60238 219 aa6.03□□□□□ -1.44
PTPRR-204ENST00000440835 TNFSF15O95150 251 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms